| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1577 |
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| Symbol | |
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| ID | 8323668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1657948 |
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| End bp | 1660200 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644952714 |
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| Product | histidine kinase |
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| Protein accession | YP_003110172 |
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| Protein GI | 256372348 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.348656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCTA AACTCGAGCC GGTGGTGGCG GCCGCGTTGG ACGGTGATGC TCGAGCATTG
GACCTGCGTG GTCTGCGCGT GGGTTACGGC TCCGTCGTGG TGCTCGACGA CGTCTCGCTC
GTGATCCACC CTGGGGAGCT CGTCGGCCTC GTCGGCGACA ACGGGGCAGG CAAGACCACG
CTCGTCAAGG CCATCGCTGG GGAGCTGGCG ATCCAGGCAG GGTCGATTCA GCCTCGTGAT
CGTGACGTCG CCGTGGTCTG GCAAGACGTC GAGCTCGTCG AGAGCCTGAG CATCGCCGAA
AACCTCGTTC TCGGTCGCGA AGGTCGTCGC CTGGTGTCGC CTCGTCGGAC GCACGCAGCC
GCCCACGAGG TCCTTGCGAG AGTCGGCCTC GCCATCGACG ATCTCTCGCG ACCCCTGCGA
ACGCTCTCCG GTGGACAGCG GCGGCTCGTC GCCATTGCGC GCCAGGTCGC GAGGGAGCCG
GACTATCTCC TTCTCGACGA GCCGACGGCC TCGCTCGGTG CGCTCGAGGC CGCGGCCGTG
ATGGCGCTCG TTGCGCGCAT TCGGGAGCGT GGTGTCGGAG TCTTGCTGGT GTCGCATGAT
CTCGGCCTCG TCGCGAGTGC GTCGGATCGT GTCGTCGTGC TGCACCATGG CAAGGTCGTC
GCGACGGTCG ACGGCGGCAC GGTGGGGCCG GAAGAACTCG GGGAGCTCAT CGTCGCCGGG
TCCTCCCAGG AGAGTTCACG ACGTCAGCTG GCTCGCTTTG CGAGCCTCGT CGAGCAGGTG
GCCGCCATCG ACGAGGGTAC CGGCGTCACG GCGATCACGG CAGCGTGTTC CGTCGCCCTC
GGCGCTGTAC CGGTCGCGGC GCTCCTCGGC GAGTCGATGG GGGCCCTCCG TGTCGTGAGC
GCTCACGGCC TCGATCCGCT CGCGCAGACG CGACTCGAGC AGGCGATCGT CGACGCTGAT
GGCCCGATCG CCGAGGCGCT GACCGTCGGA GCAGCTCGCG ACGGAGAGCT CGAGCTCGAC
GGAGAACGTC GCTCGCTCTG GGCCGTTCCG ATGCTCGGAC CGCGCGGAGC GATCGGGGTA
CTGGCCGTCA TCGTCGGGCG TCCGCTCGAG CACGATCGCA CTCGGGCACA GCTCGCCTCG
CTCTATGCCG CGACCATCGC CACGACGGTG GAGCGCGAAC GCGTGCTCCA CGCCCTTGAG
CAGCGCAACC ACGTGCTCGA GGTGCTTCAA CGCTTCCTCG AGGTGCTGGC GGGGGGTGCG
CGTGTCGAAC CGGCGCTGGA CGCGGCGCTG TCCGTGCTGA AGGATGGTCT CGGGGCGGTC
GAACTCGAAC TCGTCGAGGG CGCGGCGTTG ATCGAGGCGC GGCTGGACCG AGTGCCGGGG
ACCCTTGCGC GCGTGATCGA ACTCGACGGC GCCGAGTCGA CTGCGCTCCT CGCCACGCTT
GGGGACGACG CCCCGCCCGA TGAGGCTGCA GAGCTCCTAT CTGCGGCTGC GAGTTCCGTC
CGGCTCGCCC TGGAGCGCCG GCGCGTGGAG CAGGCCGAAC GCGAGGCGGC GGCCTTGCGG
CGATCGCAGG CACTGCAAGT TGCCTTCGTG CAGCGGCTCA GTCACGAGTT GCGCACGCCC
CTGACGGCGA TCACGGGGTA CGCTTCCAGC CTGCTTGCCG AAGACGTGCG TTGGGACACG
GAGTCCGAGC GCCGATTCTT GCAACGCATC GTCGCCGAGT CACAGCGTCT GGCCCGTCTC
GTCGGTGATC TCCTCGACCT CTCCGCGATC GAGTCGGGCA CCCTCAGGGT GCGGCGAGAC
TGGGCGGAGG TTGCCTACAT CGTCGAGGCG GCCGTTGCCT GCGTACCGGA GGTGGTGGTG
GACGTCGACC TCGACGACGT CCCGCCCGTC TTCGTCGACC ACGACCGTAT CGAGCAGGTG
CTCGTGAACC TGCTTCACAA CGCCGCGTCT CACAATCCGC CTGGAACGCA CGTGCGTGTG
ACGGCACGAC GCGACGACGA TGGCGGGGTG GTCATCGCGG TCGAGGATGA CGGGGCGCCG
CTCCCGGCCG GGGTGAGCGT CGAGGAGCTC GCGCAGCGTC ATCGCGAAGG CACTGGCAAT
GGCCTCGGCC TCGCGATCTC ATCGAGCATC GTTGCCGCCC ACGGCGGCGT CCTGCGGCTC
GTGCCGCGAG ACGTCGGCAA GCGATTCGAG GTCCAGCTCC CAGAGGCCGA TGAGGCAGCG
GCTGACGCCG TCCTCGGGAT GGAGCGCTCA TGA
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| Protein sequence | MTPKLEPVVA AALDGDARAL DLRGLRVGYG SVVVLDDVSL VIHPGELVGL VGDNGAGKTT
LVKAIAGELA IQAGSIQPRD RDVAVVWQDV ELVESLSIAE NLVLGREGRR LVSPRRTHAA
AHEVLARVGL AIDDLSRPLR TLSGGQRRLV AIARQVAREP DYLLLDEPTA SLGALEAAAV
MALVARIRER GVGVLLVSHD LGLVASASDR VVVLHHGKVV ATVDGGTVGP EELGELIVAG
SSQESSRRQL ARFASLVEQV AAIDEGTGVT AITAACSVAL GAVPVAALLG ESMGALRVVS
AHGLDPLAQT RLEQAIVDAD GPIAEALTVG AARDGELELD GERRSLWAVP MLGPRGAIGV
LAVIVGRPLE HDRTRAQLAS LYAATIATTV ERERVLHALE QRNHVLEVLQ RFLEVLAGGA
RVEPALDAAL SVLKDGLGAV ELELVEGAAL IEARLDRVPG TLARVIELDG AESTALLATL
GDDAPPDEAA ELLSAAASSV RLALERRRVE QAEREAAALR RSQALQVAFV QRLSHELRTP
LTAITGYASS LLAEDVRWDT ESERRFLQRI VAESQRLARL VGDLLDLSAI ESGTLRVRRD
WAEVAYIVEA AVACVPEVVV DVDLDDVPPV FVDHDRIEQV LVNLLHNAAS HNPPGTHVRV
TARRDDDGGV VIAVEDDGAP LPAGVSVEEL AQRHREGTGN GLGLAISSSI VAAHGGVLRL
VPRDVGKRFE VQLPEADEAA ADAVLGMERS
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