Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1528 |
Symbol | |
ID | 8323613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1598539 |
End bp | 1599945 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644952660 |
Product | glutamyl-tRNA synthetase |
Protein accession | YP_003110124 |
Protein GI | 256372300 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.819487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCCTG AGCGCGTACG CTTCGCGCCA TCACCGACGG GCATGTTCCA CGTCGGGTCA GCACGCACTG CCCTGTACAA CTGGCTCATC GCGCGCCAGA GCGGAGGTAC GTTCATCCTG CGGATCGACG ACACCGACGA GGAGCGCAAT CGCGAGGCCT GGGTCGACGG CATCCTGCGC GCCATGGAGT GGCTCGGCCT CGACTGGGAC GAAGGTCCGC TCCGGCAGTC GTCGAGGGCC GAGCGCTACC GTGCCGTCGC CGAACGGCTG GTGAGCGAGG GGCACGCCTA TTGGTGCGAT TGCACGCGAG AGCGCGTCGA GGCCCGCAAG CAACCCGGCG AAGCGCCAGG CTACGATGGC TTCTGCCGTC ACCGAGGGCT CGGGCCCGGC CCGGGGCGCG CGCTCCGCTT TCGTGTCCCC GACCATGACG TGGTCGTGAC GGACCTCGTC CGAGGGGAGG TGCGTTTCCC GGCCGGCTCC ATCGAGGACT TCGTCATCGT CAAGTCCACC GGTCAGCCGC TCTACGTCCT CGCCAACGTC GTCGACGACA TCGACCTCGC CATCACGCTC GTCCTGCGCG CGGAGGAGCA CCTCCCCACG ACGCCGAAGG CGGTGTTGCT GCACGAAGCG CTGGCAGCGC CGCCGCCGCG CTTCGCCCAC CTCTCTTTTC TCGTGAACGA CCAGCGTCGC AAGCTCTCCA AGCGCCGCGA TCGAGTTGCG GTGGAGGACT ACCGTCAGAT GGGCATCCTC CCCTGGGCGC TGCTCAACTA CGTGGCGCTC CTCGGATGGA GCCCAGGCAC CGACGAGGAG TTCTTCAGCC GTGAGGAGCT CATCGCTCGC TTCGACCTCG CTCGAGTCCA GCACTCTCCC GCCTTCTTCG ACGAGCGCAA ACTCCTGGCG TTCAATCAGC ACTACCTCCA GGCACTGCCA CTTGCCGAGC TCCTCGAGCA AGGCCACGAC CACTTCGCCT CGATCGGCGC GTTCGCCACC CAACAGGCAA CCGAGCTGCT CACTCAGCTC CTTCCACTCG TCGTGCCTCG AGCACGAACA CTGTCCGAGG CAGCAGCGAT GAGTGCCTTT CTCTTTGCGG ACCCACCCAT CGCCCCGAAC GAGATCGAGG CACTCCGGTC GGAGTCCGCG TCGTGGCTCG GGGCGATCGC CGCACGTCTC GGGGAGCTCG AGCGCTTCGA TGCCCCCTCG ATCGAAGCAG CCCTTCGGGC GCTCGCCGAC GAGCTCGGGA CGTCGCTGCG CCATCTCCAA GCACCGCTGC GCGTCGCCGT CACCGGCAGT CGTGTCGGAC CCCCGCTGTT CGAGTCGCTC GCACTCGTCG GGCCCGAGGC CACGCTACGA CGCATCCATG CTCTCCGCGT GACCCTCGAG GACCGGACCC AAGCACACGC CGGGTAA
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Protein sequence | MAPERVRFAP SPTGMFHVGS ARTALYNWLI ARQSGGTFIL RIDDTDEERN REAWVDGILR AMEWLGLDWD EGPLRQSSRA ERYRAVAERL VSEGHAYWCD CTRERVEARK QPGEAPGYDG FCRHRGLGPG PGRALRFRVP DHDVVVTDLV RGEVRFPAGS IEDFVIVKST GQPLYVLANV VDDIDLAITL VLRAEEHLPT TPKAVLLHEA LAAPPPRFAH LSFLVNDQRR KLSKRRDRVA VEDYRQMGIL PWALLNYVAL LGWSPGTDEE FFSREELIAR FDLARVQHSP AFFDERKLLA FNQHYLQALP LAELLEQGHD HFASIGAFAT QQATELLTQL LPLVVPRART LSEAAAMSAF LFADPPIAPN EIEALRSESA SWLGAIAARL GELERFDAPS IEAALRALAD ELGTSLRHLQ APLRVAVTGS RVGPPLFESL ALVGPEATLR RIHALRVTLE DRTQAHAG
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