| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1396 |
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| Symbol | |
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| ID | 8323478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1455446 |
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| End bp | 1458643 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644952527 |
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| Product | helicase domain protein |
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| Protein accession | YP_003109993 |
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| Protein GI | 256372169 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTCA TCCGCAACAC CGGCACGGAC CGCGTGATCG ATCTGATCCG TCTGGGGATC
GGGCGCAGTC ATCGGCTCGA CGTGCTCACG CCCGCCTTGT CGCTCTTCGC ATTCGCGGAG
GTCAATCGCG AGGCGCGGGA ACTGGAAGGC TGCCGCCTGG TGTTGCCGCC GAACGGTTCC
GATCTTGCGA TGCTGGGTAC GGCTGCCGAC CGTCCCGCTC GCAACCGCCT GCAATCCCGC
TGGCTGGCGA AGCGCTTGCT CCAGTGGATC GAGAACAAGG CGGAAGTCCG CCGCGCGTTG
AGCCCCATCC CGCAAGGCGC GTTCGTCATC CGCAACTCAA ACGGCCGCCC CGTACAGGCG
CTCCTCGGTT CGCTGGCGTT CAGCACGGAC GGCCTCGGCC TGACGCCGGG CAATCCGATG
AACCTGATCC AGGCATCCGA GACACTCGAA GAGGCCACGT TACTAAGCGA GTGGTTCGAT
GCACAGTGGT CCGCCCTTGC GGCCGACCCT GCCTCGAAGA CCGCATTGAT CGACAGCTTG
AAAGAACTGG CCGGGAACCG GGACCCGCTT CTCGTCTATG CTTTGATCCT GCACCACATC
TTCCGGGACC GAGGAGAAGA ACTCGACGAG GAGCGCGTGG TCAAGACCGC GACTGGTATC
CGCAACACGG TGGTCTGGAA GAAGCTTTTC AAGTTTCAGC GTGACGGCGT GATCGGAGCC
ATCGACAAGC TCAACCGTTT CGGCGGCTGC ATCATCGCCG ACAGTGTCGG CCTTGGGAAG
ACCTTTGAGG CACTAGCGAT CATCAAGTAC CACGAGCTGC GCAACGATCG CGTGCTCGTG
CTCTGCCCCA AGCGCCTGCG CGACAACTGG ACGCTCTACA AGGCCAACGA CCGCCGCAAC
TTCCTGGCCC CGGACCGCTT CAACTACGAC GTTCTGAACC ACACGGATCT GTCGCGCGAT
AGCGGACTCT CCGGCGATAT CGATCTCGCG GACGTGAACT GGGGAAACTA CGACCTCGTT
GTGATCGACG AGTCGCACAA CTTCCGCAAC AAGCGCACAC CGCAGAAGGG CGGTGAGACG
CGCTACGACC GACTCATGCG CAAGATCATC AAAGAGGGCG TGAAGACCCG CGTCCTCATG
CTTTCCGCCA CTCCGGTCAA CAACCGCATG GCCGACCTGC GCAACCAGAT TGCCTTTGCC
ACCGAGGGCG ACGACACGGC CCTGCGCGAC CACGGTGTCG GAAGCATCGA CAGCACCACC
CGCCTGGCGC AGCAACAGTT CAACCGCTGG CTCAACCTGG ACGAGTCCGA GCGCACGCCG
TCGCGGTTGA TCGAGATGCT GGGTTTCGAC TACTTCACGC TCCTGGACCT GCTGACCATC
GCCCGGTCGC GCAAGCACAT CGAAAAATAC TACGGCATCG CCGAGACGGG ACGATTCCCG
GACCGCTTGA AGCCGATCAA CATCAAGGCC GACGTGGACC TGGCGGGCAA GTTCCCGCCC
ATCCGCGACA TCAACCTCGA AATCCGCCGC CTGAATCTGT CCGCCTACGC GCCGTTGCGG
TACGTGCTTC CGCACAAGCA GGAAGCCTAC GACAAGAAGT ACAGCACCGA GGTCAAGGGT
GGCACGGGCT TCTTCCGGCA GGTGGACCGC GAAGAGAGCC TGATCCATCT CTTGCGCGTG
AACGTACTTA AGCGCATGGA AAGCGCCGTG CCGTCGTTCG CCCTGACCGT CGAGCGGCAG
CTCCGAGACG TGGAGGCGAC GCTGGAACGG ATCGAGAACC ACGCCGAGGA GATGGAGGAA
ATTGACATCG AAGACCTGGA TGTCGACGAC CCCGCCTTCG AGAGTCTCCT GGTCGGCCGC
AAGGTCAAGG TCCTCCTCAA GGACCTGGAT CTTATCCGTT GGAAGCAGGA CCTGATCGAA
GACCGCAACC GGCTAGTCAA ACTCCATACC GCCGCTGGGC AGGTGGACGC TTCGCGTGAC
GCCAAGCTCG CCGCGCTTCG GAAAATGATC GAGCAGAAGG CCGAAAACCC CATCAACCCC
GGCAACCGGA AGTTGATCGT CTTTACGGCC TTCGCGGACA CGGCCCGCTA CCTCTACGAC
CAGCTCGCCC CGTGGGCCAA AAAGCGGCTC GACATCGACA CCGCCCTGGT CACCGGCACC
GGCTACAACC AGACCACCCT GCCCAAGCTC CGCAAGGATC TCGCCTCCAT CCTCACGGCC
TTTTCGCCGC GCTCCAAGGA ACGGCCGGAA GACTTGGCCG ACGAAGGCGA ACTCGACCTC
CTGATCGCCA CCGACTGTAT CTCCGAGGGC CAGAACCTCC AGGACTGTGA CTGGCTCATC
AACTACGACA TCCACTGGAA CCCGGTGCGC ATTATCCAGC GGTTCGGCCG GATCGACCGC
ATCGGCTCGC CCAACGAGCG CATTCAGCTC GTCAACTTCT GGCCCAACAT GGAGCTAGAG
GAGTACATCA ACCTGGAGCA GCGCGTGAGC GGCCGCATGG TGCTCCTCGA CATCTCGGCG
ACCGGCGAGG AAAACCTCAT CGAGCAGCAG TCCGGCAACC AGATGAACGA CCTAGAGTAC
CGCCGCAAGC AGCTCCTCAA GCTCCAGGAT GCGGTCATCG ACCTGGAGGA CCTCTCGACC
GGTGTCTCGA TCGCCGATCT CACGCTGACC GACTTTCGCA TCGACCTCGC GGAGTTCCGC
AAGGCGCACC CCGGCGTGCT GGAGAACCTG CCGCTCGGCA CCTACGCGGT CACGACGACG
ACCGAGGCCG AGATACCGCC CGGCATCATC TTCTGCCTGC GGGCTGAGGG TGAGGCGGCG
AAGCGAACGG TCGAGGCGGG CTATCCACTG GCTCCGCACT ACCTCGTTCA CGTGGGCGAG
GACGGCACCG TACTGCTTCC CCACACCCAG GCCAAGCAAA TCCTCGATCG GCTGAAGCGC
CTCTGCGCCG GGCGCGATCT GCCCGATGTC GGAGCCTGCG CCCGTTTCGA CCGGGCCACC
AAGCAAGGCG AAGACATGCG CTCCGCGCAA CGGCTGCTGG CCGCCGCCGT CGCCTCGGTG
GTGCGCAAGA ACGAGGAGCG GGCCGTCGCC AGCCTTTTTT CTCCGGGCGG GACGCACGCG
CTCAAAGGCG AATTTGCCGG CATCAACGAC TTCGAGGTGG CGGCCTATCT TGTGATCTTG
CCCGAGGCGG GCGAATGA
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| Protein sequence | MKFIRNTGTD RVIDLIRLGI GRSHRLDVLT PALSLFAFAE VNREARELEG CRLVLPPNGS
DLAMLGTAAD RPARNRLQSR WLAKRLLQWI ENKAEVRRAL SPIPQGAFVI RNSNGRPVQA
LLGSLAFSTD GLGLTPGNPM NLIQASETLE EATLLSEWFD AQWSALAADP ASKTALIDSL
KELAGNRDPL LVYALILHHI FRDRGEELDE ERVVKTATGI RNTVVWKKLF KFQRDGVIGA
IDKLNRFGGC IIADSVGLGK TFEALAIIKY HELRNDRVLV LCPKRLRDNW TLYKANDRRN
FLAPDRFNYD VLNHTDLSRD SGLSGDIDLA DVNWGNYDLV VIDESHNFRN KRTPQKGGET
RYDRLMRKII KEGVKTRVLM LSATPVNNRM ADLRNQIAFA TEGDDTALRD HGVGSIDSTT
RLAQQQFNRW LNLDESERTP SRLIEMLGFD YFTLLDLLTI ARSRKHIEKY YGIAETGRFP
DRLKPINIKA DVDLAGKFPP IRDINLEIRR LNLSAYAPLR YVLPHKQEAY DKKYSTEVKG
GTGFFRQVDR EESLIHLLRV NVLKRMESAV PSFALTVERQ LRDVEATLER IENHAEEMEE
IDIEDLDVDD PAFESLLVGR KVKVLLKDLD LIRWKQDLIE DRNRLVKLHT AAGQVDASRD
AKLAALRKMI EQKAENPINP GNRKLIVFTA FADTARYLYD QLAPWAKKRL DIDTALVTGT
GYNQTTLPKL RKDLASILTA FSPRSKERPE DLADEGELDL LIATDCISEG QNLQDCDWLI
NYDIHWNPVR IIQRFGRIDR IGSPNERIQL VNFWPNMELE EYINLEQRVS GRMVLLDISA
TGEENLIEQQ SGNQMNDLEY RRKQLLKLQD AVIDLEDLST GVSIADLTLT DFRIDLAEFR
KAHPGVLENL PLGTYAVTTT TEAEIPPGII FCLRAEGEAA KRTVEAGYPL APHYLVHVGE
DGTVLLPHTQ AKQILDRLKR LCAGRDLPDV GACARFDRAT KQGEDMRSAQ RLLAAAVASV
VRKNEERAVA SLFSPGGTHA LKGEFAGIND FEVAAYLVIL PEAGE
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