Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1261 |
Symbol | |
ID | 8323337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1317246 |
End bp | 1319012 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644952393 |
Product | DNA primase |
Protein accession | YP_003109865 |
Protein GI | 256372041 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCATAG CCGACGCCGA TGTGCGGCGC GTACGCGATG CGACGGACCT CGTCGCGCTC GTCTCCGAGA CGGTCGCGCT GCGCCGGGTC GGGAGGCGTT GGGTCGGTCT GTGTCCGTTC CACGACGAGC GCTCGCCGTC GTTCAGTGTG AACCCAGAGC TCGGGGTGTA CTACTGTTTC GGCTGTCACG CCCGAGGTGA TGCGATCACC TTCGTCCGTG AGGTGCAGGG CCTCGACTTC ACTGAAGCCG TCGAGCAGCT TGCCCGACGA GCCGGTCTTC GCATCGAGCA CGAGGCTGCC GGTGAGCCGC GAGCGTCCAC GCGTCGCGAG GCACTTACCG TGCTCGAAGC CCAGACCACC TGGTACGCGG ACCAGCTCGC TGGACCGGCA GGTGAGCGCG CTCGAGAGTA TCTCGCGGCT CGAGGGATCA GCGAGGACCA GATCGCGAAG TTCCGCATCG GCTATGCACC GCCGTCGCGA GCGGCGAGCC TCGCCGAACT CGGAGCATCG GCGGCGATCG CGCTCGAGGT CGGGATCCGC GTGCGCGGCC AGGACGGGTC GCTGCATGAC CCGATGAGCG GACGCATCGT GTTCCCGATC CGCGAGGTCG CGGGTCAGGT CATCGCGTTC GGCGGTCGGG TCGTGCCTCC GGCCAGAGAT GGCGTCCCGA AGTATCGGAA CACGCAGGAC ACGGCCTACT ACCACAAGCG TCAGGTCCTC TACAACCTCG ATCGAGCGCG GTCGACGTTC CTGCGCGAGC GGCGCGCGTT GGTGTGCGAG GGCTACACGG ACGTGATCGC ACTCGATGCC GCTGGCGTCG CTGCGGTCGC GACCTGCGGC ACGGCGCTCA CCGACGACCA CCTGCGCATC CTGCGTCGCT TCGCTCCCCA GGTCGTGGTC CTGTTCGACG GTGACGACGC AGGCCAGCGA GCGGCGGAGC AGGTCGCCCC CCTCGCCGAG GCAGCAGGCG TGGAGCTTCT CGTGGCCACC TTGCCGGGAG GACGTGATCC TGCCGAGGCC TTCGCCGAGG ATCCCGATTC GCTTCGACAG GCTCTCGCGA GCCCCGTGCC GGTGGCTCGG TTCCGCCTTG AACGAGTCCT CGCCCGTGCC GATCTTCGAT CGGTGGAGGG GCGGGCGCGT GCAGTGGCCG ACGTCGCTGC GGTGCTCGCC TCGGTCGGCG ACCCGCTCGT GCGGTCTGAG TACATCGCCA TGCTGGCGGA TCGGACCGGA TTTCGCGAGG CCGAGCTTGC GGCGCGGCTT CCGAGCGCCC TCCGACCGCG ACGTCTGCGT ACGAGCGAGG CGTCAGGCCT CGATCGCCCT GCGGCGTCGG TGCTCATCGC CCTCGCCAGC GATCCTGGGC TCGGGGACCT CGTGGTACCC GCACTGTTTC GCGACCCGAC CTATCGTGCA CTCGCTGCAG CCCTCGGCTC GCGAGGAGAG GCGCCGGTCG CGGCCGCGCT CGAGGGCGTC GGCGATGACG TCCGCGAGCT CTACCATCGC ATCGCTGCCA GCGACTCCGA AGGGAGCTTC GACGATGCCC TGGTGGTGCT CGTGTTGCGC GAGGCGGGTG TCGAACTCGA GCGTGAGGCG CGCGGCCTTG CCGGCCTCTC TGGACCTGAG CGCGAGGAGC GCCAGCGTCG CTGGACGGAT CACATCATGA CCCTGCATCG CCTTCGTACG GAACCTCGAG ATCTCGATGC AGCCGGTGCG CTGCTCGCCT ACCTCGTCGA GGCGCGGTCG GACGTCGCGC TCGGGAGCGG CTCGTGA
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Protein sequence | MAIADADVRR VRDATDLVAL VSETVALRRV GRRWVGLCPF HDERSPSFSV NPELGVYYCF GCHARGDAIT FVREVQGLDF TEAVEQLARR AGLRIEHEAA GEPRASTRRE ALTVLEAQTT WYADQLAGPA GERAREYLAA RGISEDQIAK FRIGYAPPSR AASLAELGAS AAIALEVGIR VRGQDGSLHD PMSGRIVFPI REVAGQVIAF GGRVVPPARD GVPKYRNTQD TAYYHKRQVL YNLDRARSTF LRERRALVCE GYTDVIALDA AGVAAVATCG TALTDDHLRI LRRFAPQVVV LFDGDDAGQR AAEQVAPLAE AAGVELLVAT LPGGRDPAEA FAEDPDSLRQ ALASPVPVAR FRLERVLARA DLRSVEGRAR AVADVAAVLA SVGDPLVRSE YIAMLADRTG FREAELAARL PSALRPRRLR TSEASGLDRP AASVLIALAS DPGLGDLVVP ALFRDPTYRA LAAALGSRGE APVAAALEGV GDDVRELYHR IAASDSEGSF DDALVVLVLR EAGVELEREA RGLAGLSGPE REERQRRWTD HIMTLHRLRT EPRDLDAAGA LLAYLVEARS DVALGSGS
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