| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1147 |
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| Symbol | |
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| ID | 8323217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1195043 |
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| End bp | 1197073 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644952275 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_003109753 |
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| Protein GI | 256371929 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTCC TCGAGGTTCG TGACCTGAGG ACGCGCATCA GGCTCCGCAA GGGCGAGGTG
CGTGCGGTCG ATGGTGTGAG CTTCTCGCTC GAGCAGGGCA AGACGCTCGG CATCGTTGGC
GAGTCCGGGT CGGGCAAGAC GATGATGGGG ATGTCGATCC TCGGCTTGCT GCCCCAGGGA
GGCTACATCG CCGGGGGCGA GATCCTCTTC GACGGCGTCA ACCTCGCCGG GCTGTCGCGG
AGGGAGCTCC AGGACGTGCG GGGCGGCAAG ATCGGGGTCG TGTTCCAGGA CCCGATGACG
TCGTTGAACC CCTGCATGAC CATCGGTGAC CAGATCACTG ACGTCGTTCG TCGGCACCTT
GGCTACTCGA AGGACAAGGC CATCGAGCGA GCGCTCGAGG TCCTCTCGCT CGTCGGTATG
CCCAATCCGC GCGAGCGGCT CGAATCCTAC CCTCACCAGC TGTCGGGCGG ACTGCGCCAG
AGGGTGATGA TCGCCATCGC GCTGAGCTGT GATCCGAAGC TCGTGATCCT CGACGAGCCG
ACGACCGCCT TGGACGTCAC CATCCAGGCC CAGATCCTCG AACTGCTCGA GGACCTCAAG
GCGAAGCTCG GCATGGCGAT GCTCCTTATC ACGCACGACA TGGGCGTGAT CGCAGGTCGC
GCCGACGACG TCATCGTCAT GTACGCCGGA GAGATCGTCG AGCATGCTGA CGCCGCCGAG
CTGTTCGCCT CCACCTACCA TCCCTACACC GAGGCGCTCC TCGCATCCAT TCCACCGCTG
ACGGGCGATG CACCCGAGCG CCTGTACTCG ATCCCGGGAA TCCCGCCCGA CCTCACGGGC
GATCTCGTGG GATGCCGTTT CGCGCCGCGG TGTCACTACG CACAGGAGCG CTGCCGCGTC
GAGAAGCCGC CGTACACGAC CCCGGAGGGC TATCTCCATC CGTTTGCCTG CTTCTATCCG
GTTGGAGCAC CGGAGCGTGT CCCGATCAGC CTGGAGCGTC GCACCGGACA GCGCACCGTC
ACGGACCGGC CGGTGCTGCT CGAGTTCGAC CACGTGTCGA AGGAGTACCC CGTCACCAAG
GGCGCGGTGG TGCAGCGCAA GATCGGCACG GTGAAGGCGG TGAGCGACGT GTCGTTCACC
GTCTACGAAG GAGAGACCTT TGGGCTCGTC GGCGAGTCCG GGTGTGGGAA GTCCACGACC
GGTCAGATGG TCGTGGGGCT CGAGCAGCCC GCGGCGGGCG ACATCCGGTT CGCAGGCCGC
TCCATCGTCA ACGAGCGTGG TTACGTACGC GAGGTGCGGC GCGAGCTGCA GCTCATGTTC
CAAGATCCCT TCGCATCGCT CGATCCGCGG ATGCGCGTCA AGGAGATCCT CGAAGAACCC
CTCGACATCC ACAAGATCGG CACCAAGGCC GAGCGTGTTG AGCGGATCGC GAGCCTGCTC
CAGGAGGTCG GTCTGGCCCC TGCGGCCATG GAGCGCTATC CCCATGAGTT CTCCGGAGGC
CAGCGCCAGC GCATCGGCCT TGCGCGGGCG CTCGCGTTGT CGCCGCGACT GATCGTCGCG
GACGAGCCGG TGTCAGCGCT CGACGTGTCG ATCCGATCGC AGGTGCTGAA CCTGATGAAG
GATCTGCAGG CTCAGCACAA CCTGACCTAC ATCGTGATCT CGCACGACCT GTCGGTGGTG
CGCTATCTGG CTGATCGGAT CGGCGTGATG TATCTCGGCA AGCTGGTCGA GGTTGGCTCG
GGCGACGACA TCTTCGAGAG CGCGAAGCAC CCTTATACGC ACATGCTGCT CGAGGCCGTT
CCCGAGCCGG ATCCGGAGGT CGAGCGTACG AAGGAGCGCT CGCTGGTGCG TGGGGAACTC
CCGTCGGCGA TGACCCCTCC ACCTGGGTGT CGGTTCCACA CGCGCTGCGC CTATGCGCAG
GACATCTGCC GCACCGAGGA GCCCCCGATG CGCGACTTCG GAGGCGTCCA CCACGCGGCG
TGCCACTTCC CCCTGTCGGT GCGACCTCGC GAGGCAGCAG CGCCGCGCTA G
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| Protein sequence | MALLEVRDLR TRIRLRKGEV RAVDGVSFSL EQGKTLGIVG ESGSGKTMMG MSILGLLPQG
GYIAGGEILF DGVNLAGLSR RELQDVRGGK IGVVFQDPMT SLNPCMTIGD QITDVVRRHL
GYSKDKAIER ALEVLSLVGM PNPRERLESY PHQLSGGLRQ RVMIAIALSC DPKLVILDEP
TTALDVTIQA QILELLEDLK AKLGMAMLLI THDMGVIAGR ADDVIVMYAG EIVEHADAAE
LFASTYHPYT EALLASIPPL TGDAPERLYS IPGIPPDLTG DLVGCRFAPR CHYAQERCRV
EKPPYTTPEG YLHPFACFYP VGAPERVPIS LERRTGQRTV TDRPVLLEFD HVSKEYPVTK
GAVVQRKIGT VKAVSDVSFT VYEGETFGLV GESGCGKSTT GQMVVGLEQP AAGDIRFAGR
SIVNERGYVR EVRRELQLMF QDPFASLDPR MRVKEILEEP LDIHKIGTKA ERVERIASLL
QEVGLAPAAM ERYPHEFSGG QRQRIGLARA LALSPRLIVA DEPVSALDVS IRSQVLNLMK
DLQAQHNLTY IVISHDLSVV RYLADRIGVM YLGKLVEVGS GDDIFESAKH PYTHMLLEAV
PEPDPEVERT KERSLVRGEL PSAMTPPPGC RFHTRCAYAQ DICRTEEPPM RDFGGVHHAA
CHFPLSVRPR EAAAPR
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