| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1144 |
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| Symbol | |
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| ID | 8323214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1190525 |
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| End bp | 1192351 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644952272 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003109750 |
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| Protein GI | 256371926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.471002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCACA TCCGGCCGTC GCGACGGCGT CTCCTCCTCC CTCTTCTTGT GGGTGCAACC
GGATTCGCCC TCGCTGCGTG TGGAACGTCC GGTGCGGCCG AGCCGTCGAG CGCCTCACCA
CACGGAGTCG TGACGTTCGC GGAACAGGTC GGGGCTGCTC CCAACTACAT CTTCCCGTTC
ACCGCGAGCC AGTACTTCAC GGTCGACAAC ACGTCCCAGT TCCAGTTCCT CATGTACCGG
CCGCTGTACT TCTTCGGCGT CGCCGGTCGA CCGGTCATCA ACGCTGAGCT CTCCCTCGCG
GCTCTTCCGG TCTACTCCAA CAACGACACC ACCGTCACGA TCACCCTGAA GCACTACATG
TGGTCAGACG GCGAGCCGGT GACCTCGCGC GACGTCATCT TCTGGATGAA CCTGCTCAAG
GCGAACAAGG CCAACTGGGC CGCCTACGTG CCTGGCGCCT TCCCTGACAA CGTCGCGTCG
TACTCGGCTC CGAATGCATC GACCGTCGTC TTCCACCTCA CCGGCAAGGT CAACCCGACG
TGGTTCACCT ACAACGAACT GAGCCAGATC ACGCCGCTCC CCATCGCCTG GGACCGCACC
TCGCTCAGCC AGCCGGCACC CAGCCCGTCG GCCGCCAACT TGCCCGATAC GACGACCTCG
GGGGCCAAGG CGGTCTACAC CTTCTTGAAC TCTCAGGCCA CGAACGCCAA CGCCTGGGCC
TCGAGCCCGA TCTGGTCGGT GGTGGACGGC CCGTGGAAGC TGAAGAGCTC GTCGACGACC
GGGCGCATGG TGTTCGTGCC GAACCCGTCC TACACCGGGC CGGTCAAGCC GTCGCTGTCG
GAGTTCGTGG AGCTGCCCTT CACCTCAGAC ACCGCTGAGT TCAACACGCT GCGCGCCGGC
AACGGGGCGA TCACCTACGG TTACGTGCCG AGCACAGCCC TCAGTCAACT GGGCGTGGTG
CGCTCGATCG GCTACCGCAT CGAGCCTTGG GTGGAGTTCG GCTTCAACTA CTTCGTCGAG
AACTTCAACA ACCCGACCTA CGGACCACTG TTCAAGCAGA CCTACTTCCG TCAAGCCTTC
CAGCATCTCG TCGACCAGCC GCAGTGGATC TCGACCTTCC TGAAGGGCTA CGGCGTGCCG
AGCTACTCGC CGGTGCCGCT CGCGCCAGCG AATCCGTATG CCGACGCAGC ATCGAGACAC
AACCTCTACC CTTATTCGAT CTCGGCAGCG AAGTCGCTCC TCACCAGCCA CGGGTGGACG
ATGGTGAACG GCGTCATGAC GTGCGAGCGC CCGGGCACGG CCGCCACCGA CTGCGGTGCA
GGCATCGCGA AGGGCTTCAC GCTCACGCTG AGCCTGCAGT ACGCCTCGGG TACCACGTCC
ATCACCCAGG AGATGGACGC ACTCCAGTCG GCAGCAGCCA GCGCGGGTAT CAAGATCAAC
CTCTCCCAGG CGCCGTTCAA TACGGTGTTC GCCAACGCCG CCCCGTGCTC AGGTTCGAGC
TGTACCTGGC AGATCGAGAA CTGGGGCGCG GGCTGGGAGT ACTCGCCGGA CGACTACCCG
ACCGGTGGTG AGCTCTACAC AACCGGAGCC GGCTCCAACG TCGAGGGCTG GAACGATCCG
ACGACGAACA GGCTCATCGC CGCAACTCAC ACCTCGTCGA ATCCGCAGGC AGCGCTCGAT
GCCTACCAGA ACTACATGGC GAGGGTCCTC CCCGTCGTCT ACCAGCCTCT CGCCGACTAC
CAGGTATCGG CGATCGCGAA CGACCTTCAC GGCGTGAGCC AGAATGCCTT CTTGAACCTG
ACGCCCGAGG CGTGGCGCCT TGGCTGA
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| Protein sequence | MRHIRPSRRR LLLPLLVGAT GFALAACGTS GAAEPSSASP HGVVTFAEQV GAAPNYIFPF
TASQYFTVDN TSQFQFLMYR PLYFFGVAGR PVINAELSLA ALPVYSNNDT TVTITLKHYM
WSDGEPVTSR DVIFWMNLLK ANKANWAAYV PGAFPDNVAS YSAPNASTVV FHLTGKVNPT
WFTYNELSQI TPLPIAWDRT SLSQPAPSPS AANLPDTTTS GAKAVYTFLN SQATNANAWA
SSPIWSVVDG PWKLKSSSTT GRMVFVPNPS YTGPVKPSLS EFVELPFTSD TAEFNTLRAG
NGAITYGYVP STALSQLGVV RSIGYRIEPW VEFGFNYFVE NFNNPTYGPL FKQTYFRQAF
QHLVDQPQWI STFLKGYGVP SYSPVPLAPA NPYADAASRH NLYPYSISAA KSLLTSHGWT
MVNGVMTCER PGTAATDCGA GIAKGFTLTL SLQYASGTTS ITQEMDALQS AAASAGIKIN
LSQAPFNTVF ANAAPCSGSS CTWQIENWGA GWEYSPDDYP TGGELYTTGA GSNVEGWNDP
TTNRLIAATH TSSNPQAALD AYQNYMARVL PVVYQPLADY QVSAIANDLH GVSQNAFLNL
TPEAWRLG
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