| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1141 |
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| Symbol | |
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| ID | 8323211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1186377 |
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| End bp | 1188215 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644952269 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003109747 |
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| Protein GI | 256371923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.121856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA TCACAGCACG CCACCGCCTC ATCGCGGGAC TTGGCACCAC CGCTGCCGCA
GCCATGCTGC TCGCGGCGTG TGGCTCCTCG TCGAGCTCGA CCTCGTCCTC AAGCACGACC
AAGGTCTCGG GCGGTACGGC CTACTTCGCC GAGGCCGCCG GCGCAAACCC GAACTACATC
TTCCCCTTGA CCGGGGGCCC GTACTTCAGC GTCGACAACC TCGCCCAGTT CCAGATCCTG
ATGTACCGAC CGCTCTACTT CTTCGGGGTC GGCTCGACGC CAGAGATCAA CTACCAGCTC
TCCATCGGCA ACGCGCCCGT CTACTCCAAC AACGACACCA CCGTCACGAT CACCCTGAAG
CACTACATGT GGTCAGACGG CGAGCCGGTG ACCTCGCGCG ACGTCATCTT CTGGATGAAC
CTGCTCAAGG CGAACAAGGC CAACTGGGCC GCCTACGTGC CTGGCGCCTT CCCTGACAAC
GTCGCGTCGT ACTCGGCTCC GAATGCATCG ACCGTCGTCT TCCACCTCAC CGGCAAGGTC
AACCCGACGT GGTTCACCTA CAACGAACTG AGCCAGATCA CGCCGCTCCC CATCGCCTGG
GACCGCACCT CGCTCAGCCA GCCGGCACCC AGCCCGTCGG CCGCCAACTT GCCCGATACG
ACGACCTCGG GGGCCAAGGC GGTCTACACC TTCTTGAACT CTCAGGCCAC GAACGCCAAC
GCCTGGGCCT CGAGCCCGAT CTGGTCGGTG GTGGACGGCC CGTGGAAGCT GAAGAGCTCG
TCGACGACCG GGCGCATGGT GTTCGTGCCG AACCCGTCCT ACACCGGGCC GGTCAAGCCG
TCGCTGTCGG AGTTCGTGGA GCTGCCCTTC ACCTCAGACA CCGCTGAGTT CAACACGCTG
CGCGCCGGCA ACGGGGCGAT CACCTATGGT TACGTGCCGA CGGTGGACCT CAGCCAGGTG
CCTTACCTGA AGAGCATCGG CTATCGCATC GAGCCCTGGA TCGACTTCGG CTTCAACTAC
TTCGTCGAGA ACTTCAACAA CCCGACCTAC GGACCGCTGT TCAAGCAGAC GTACTTCCGT
CAGGCCTTCC AGCACCTCGT CGACCAGCCG CAGTGGATCT CGACCTTCCT GAAGGGCTAC
GGCGTACCGA GCTACTCGCC GGTGCCGCTC GCGCCGGCGA ATCCCTTCGC GGACGCCACC
TCGAAGACCA ACCCGTTCCC CTACTCGATC TCGGCAGCGA AGTCGCTCCT CACCAGCCAC
GGCTGGAAGA TGGTGAACGG CGTCATGACG TGCGAGAGCC CGGGCACGGC CGCCACCGAC
TGCGGTGCAG GCATCGCGAA GGGCTTCACG CTCACGCTGA ACCTGCAGTA CGCCTCGGGT
ACCACGTTCA TCACCCAGGA GATGGACGCG CTCCAGTCGG CAGCAGCGAG CGCGGGCATC
AAGATCAACC TCTCGCAGGC ACCCTTCAAC ACGGTCATCC ACAACGCCAC TCAGTGCTCC
GGTTCGAGCT GCACCTGGCA GATGGAGAAC TGGGGTGGCG GCTGGGAGTA CTCCCCGGAC
AACTACCCGA CCGGCGGTGA GATCTTCGGC ACCGGTGCTG GGTCGAACTT CGGCAACTGG
AACGATCCGA CCACCAACTC GCTGATCGCC GAGACCCACA CCTCGTCGAA TGCGCAGGCG
GCGCTCGATG CCTACCAGGA CTACATGGCC AAGGTCCTGC CGGTGGTCTA TCAGCCCGCC
GCCGATTACG CCATCTCCGC GATCTCGAAC AAGCTCCAGG GGGTCACTCA AAACCCGTAC
CTGAACTTGA CGCCCGAGAC GTGGTACTTC GTCAAGTAG
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| Protein sequence | MKKITARHRL IAGLGTTAAA AMLLAACGSS SSSTSSSSTT KVSGGTAYFA EAAGANPNYI
FPLTGGPYFS VDNLAQFQIL MYRPLYFFGV GSTPEINYQL SIGNAPVYSN NDTTVTITLK
HYMWSDGEPV TSRDVIFWMN LLKANKANWA AYVPGAFPDN VASYSAPNAS TVVFHLTGKV
NPTWFTYNEL SQITPLPIAW DRTSLSQPAP SPSAANLPDT TTSGAKAVYT FLNSQATNAN
AWASSPIWSV VDGPWKLKSS STTGRMVFVP NPSYTGPVKP SLSEFVELPF TSDTAEFNTL
RAGNGAITYG YVPTVDLSQV PYLKSIGYRI EPWIDFGFNY FVENFNNPTY GPLFKQTYFR
QAFQHLVDQP QWISTFLKGY GVPSYSPVPL APANPFADAT SKTNPFPYSI SAAKSLLTSH
GWKMVNGVMT CESPGTAATD CGAGIAKGFT LTLNLQYASG TTFITQEMDA LQSAAASAGI
KINLSQAPFN TVIHNATQCS GSSCTWQMEN WGGGWEYSPD NYPTGGEIFG TGAGSNFGNW
NDPTTNSLIA ETHTSSNAQA ALDAYQDYMA KVLPVVYQPA ADYAISAISN KLQGVTQNPY
LNLTPETWYF VK
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