Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1130 |
Symbol | |
ID | 8323200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 1174682 |
End bp | 1176157 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644952258 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003109736 |
Protein GI | 256371912 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAAG GTTCGCACCG ACACCGCTCA GGACTTGCGA TCGCCGTCAT CGCCGGCGCA CAGCTCATGA TCGTGCTCGA TCTCACGATC GTCAACGTGG CGTTGCCGAC GATCCAACAC GCTCTCCACT TCTCGCCGAC TGGCCTCTCG TGGATCGTGA ACGCCTATAC GTTGGTCTTC GGCGGGCTCC TGCTCCTCGG CGGGCGCTCC GGCGACCTCT TCGGCCGACG TCGCATGTTC ATGGTGGGGG TTGCCCTCTT CGCGATCGCG AGCGTGTTCT CCGGACTGGC GACCTCGCAG GCCTGGCTGA TCACCGGCCG TGCCCTGCAG GGCATCGGCG CCGCGATCGC CTCACCGACC GCCCTCGCCC TGATCTCTGC GACCTTCACC GAGGCACGTG AGCGCGGACG GGCCTTCGCG ATCTATTCCG CGGTGTCGGC GGGTGGAGCA GCGATCGGGC TGCTCGCTGG CGGTCTGCTT ACCCAATACG CATCATGGCA GTGGGTCTTC TACGTCAACG CTCCGATCGC CGCGCTCTTG CTCGTTGCCG CGCCGCGGGT GCTCGCAGAG ACCGAACGTC ACCACGGCAG CGTGGACGTG CCTGGAGCCC TGACGGGTAC CGGCGGCCTC GCGCTCGTGG TCTACGGCCT CATCCATGCC TCCACCACCT CTTGGTCCAA TGTGACGACG ATTGCGGTCC TCGCTGGCGG GGTCGTTGCG CTCGGCGCGT TCATCGTCAT CGAACGTGTC CGACGTGAGC CACTCATCGA CTTCCAGATC CTCGCCAAGC GTGAACGGGG CGGCGCTGTC GCGATGATCC TGTTCGTCGC GGCCTCGATG TTCTCCGTCT TCTTCTTCGT GTCCCAGTTC ATGCAAGACG TCGTCGGCTA CTCGCCGGTG CGAACCGGTC TCGCGTTCTT GCCGATGACG CTCGGCATCA TGATCACGGC CCAGCTCGTG TCCCGCAACC TGCACCGCGT CGGCCCGAAG CCGTTCATGG TCGGTGGGAG CGTGCTCATC GCCGTCGCCA TGGGCCTGCT GTCCCAGATG CGAGCCTCGT GGGGCTATCT CGACCTCCTC GGCCCGCTCG TCATCCTCGC CATCGGCGCC GGGAGCTCCT TCGTCTCTCT CTTCCCCACC GCGACCCACG GCGTCGAACC GCGTCGCGTC GGCATGGCCT CGGCCCTCGT GACCGTCGGA CAGCAGGTCG GTGGCACGCT CGGCTTGTCC ATCCTCGTCA CCGTCACCGT GGCCGCGGCC AAGCGGCATG CGGCAGCCCT CGCTCCGCGC CTCGCCAGCG GCCACCTCAC ACCCCAGGCA CTCACGATCC TCGCCGAGGT GCATGGCTGG GCGGCCGGCT TCGCGGTCGC GACAGGATTC GGCGTGATCG GGCTGCTCAT CGGTTTGATC GTGGTCCCGC ACCTTGGACC AACTGCGACC GAAGGAGCGG CGGAAGGGTC GGCGGTCGCC GCGTAG
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Protein sequence | MTQGSHRHRS GLAIAVIAGA QLMIVLDLTI VNVALPTIQH ALHFSPTGLS WIVNAYTLVF GGLLLLGGRS GDLFGRRRMF MVGVALFAIA SVFSGLATSQ AWLITGRALQ GIGAAIASPT ALALISATFT EARERGRAFA IYSAVSAGGA AIGLLAGGLL TQYASWQWVF YVNAPIAALL LVAAPRVLAE TERHHGSVDV PGALTGTGGL ALVVYGLIHA STTSWSNVTT IAVLAGGVVA LGAFIVIERV RREPLIDFQI LAKRERGGAV AMILFVAASM FSVFFFVSQF MQDVVGYSPV RTGLAFLPMT LGIMITAQLV SRNLHRVGPK PFMVGGSVLI AVAMGLLSQM RASWGYLDLL GPLVILAIGA GSSFVSLFPT ATHGVEPRRV GMASALVTVG QQVGGTLGLS ILVTVTVAAA KRHAAALAPR LASGHLTPQA LTILAEVHGW AAGFAVATGF GVIGLLIGLI VVPHLGPTAT EGAAEGSAVA A
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