Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1116 |
Symbol | |
ID | 8323186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1162162 |
End bp | 1163049 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644952244 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003109722 |
Protein GI | 256371898 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGAGTC CGGCAAGGGG CCGTGCCTCG TGGGCCGTCG TGGGGGTCAC GGCGATCTGG GGAGTCACCT TTCCGCTGAA CGAGCGCGCA CTCGGGAGTC TCGGCCCGGT CGAGCTCACC TTCGGACGCT TCAGCGTCGC GGCGCTCGTG CTGTGGGTGC TGGCGCTCGC ACGGGGCCAT CGCATCGATC GACGGAGCGT CGTTGCCGGC CTGGCGAGCG GCCTCGCGCT CTTTGGCGGC TACCTCACTC AGATCGAGGG TCAACGCTAC GTGTCACCGA CCATCGCGGG GTTTCTGACG GGCTTGTCGG TGGTGGTTGT GCCGATCTTC GTGATGGCGC TCGGTCGACG TCCGAGCGCT CGTCAGCTCG TCGGTATCGT CCTCGCGGCC CTCGCCCTCG TGGTGCTCTC GGCCCCACGA GGGCATGCGT CGTTCGTCGG GATCGGCCTC GAACTCGCGT GCGCCGGCTT CTTCGGGGCT CAGATCGTCG TGCTCGAGGA GCTCGGGTCT CCCGGTGATG CGATGGTGAC AGCGGCACTG CAGATGACGA CGATCGCGGC CGCGACCGTG GTCGCGGCAC CGCTCGTGGG TGCGGGTCTC GTGCCGACGC ACCTCACGCC GATCGCGGTG ACGGCCATCG TCTACGATGG GGTGCTCGCG AGCGCACTCG CCTTCGTGGT CCAAGCCTGG GCGCTCGCTC ACGCCGACAG CGTGCAGATC TCCGTGATCT ATGCGGCCGA ACCGCTGTTC GCCGCGCTCG CGTCGCTGGC CTTCGGGTAT GCATCCCTGG GCCTACCGGT GGTGGTCGGT GGACTTCTCG CGCTCGCTGC GATGGTCCTG GCATCCGTTC CGCCGGCCGC AGCACGGTCG TCCGACCCCA CCGGCTAG
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Protein sequence | MRSPARGRAS WAVVGVTAIW GVTFPLNERA LGSLGPVELT FGRFSVAALV LWVLALARGH RIDRRSVVAG LASGLALFGG YLTQIEGQRY VSPTIAGFLT GLSVVVVPIF VMALGRRPSA RQLVGIVLAA LALVVLSAPR GHASFVGIGL ELACAGFFGA QIVVLEELGS PGDAMVTAAL QMTTIAAATV VAAPLVGAGL VPTHLTPIAV TAIVYDGVLA SALAFVVQAW ALAHADSVQI SVIYAAEPLF AALASLAFGY ASLGLPVVVG GLLALAAMVL ASVPPAAARS SDPTG
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