Gene Afer_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0937 
Symbol 
ID8323001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp954769 
End bp955878 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content71% 
IMG OID644952065 
Productglycosyl transferase group 1 
Protein accessionYP_003109549 
Protein GI256371725 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCACG TGCTCGTCAC CAACGACTTT CCCCCGAAGA TCGGCGGTAT TCAGCACTAC 
CTCGGGGAGA TCTACCGTCG GCTCGACCCG ACGAGCTTCG TCGTCGTCAC GCGTGACGAG
GCGGGCGCCG AGGCCTTCGA TCGCGCCTTC GGGGCGCGCG TCGTGCGAGT GCGCGGACCG
CTTCTGCCCA CTCGGGCCCT GGCCGCCCGA GTTCGCGGGC TCGCACGCGA GATCGACGCG
GACCTCGTGG TGATCGACCC GATCTGGCCG CTCGGTGAGG TCGCGGCGAG CCTAGGGCTG
GGGTGGGTTG GTGTCGCACA CGGTGCGGAG CTCACGTTGC CGCTTCGACT GTGGCCGACG
GCCGGTCGAA TCCGAAGTGT GCTCGCGGGG GCGCTCGGCG TGGTGGCAGC GGGAGGTTTC
GTCGCGCGCG CGCTCGATGG GGTGGTGCCG GCCGATGCGA TCGCGACGGT GCCGCCGGGG
GTGGATCTCG AACGCTTCTG CGTCGGCGAT CGCGAGCGTG CGCGCAAGGA CCTCATGGTG
GACCCGGAGC GATCGCTCGT GCTGTTCGTC TCCCGTCTCG TCCCGCGTAA GGGCGCCCAC
ATCGTCATCG ACGCGGTTGC CCAGCTGCAT CGGCCGGTGG AGCTGCACGT GGTCGGTGAC
GGGCGAAGCC GCAGTGCTCT CGAGCAGCGA GCGCGCCGTC GGGGAATCCT CGCGGTGTTC
GAGGGGCGTG TGGCGCTGGA TCGGCTGGTG GCGAGCTACC AGGCCGCCGA CGTCGTCGCC
TTTCCTGCGC ACGATCGTTG GTTCGGTCTC GAGGAGGAGG GTTTCGGCAT CGTCGCGCTC
GAGGCGCAGG CCTGCGGCGT TCCCGTCGTG GTCGGCGTGA GCGGCGGGAC CGCGGAGGCC
GTCGATCCTG CGAGTGGACG GCTCGTCGCG AGTCGCCGTC CGAGGGCCTG GGCCGAGGCG
ATCGAGGAGC GTCTCGCTCA CACGAGCCCT CCGGTCGCCG ACGCGCGTGG CTTCGTGGAG
CGTCATCACG GCTACGACCG GTTGGCCGAC GAGTGGCATG CGGGACTCGA GCGCCTCGCG
AGCCGTGGAC GTACGGCCGG AAGCGGCTAA
 
Protein sequence
MRHVLVTNDF PPKIGGIQHY LGEIYRRLDP TSFVVVTRDE AGAEAFDRAF GARVVRVRGP 
LLPTRALAAR VRGLAREIDA DLVVIDPIWP LGEVAASLGL GWVGVAHGAE LTLPLRLWPT
AGRIRSVLAG ALGVVAAGGF VARALDGVVP ADAIATVPPG VDLERFCVGD RERARKDLMV
DPERSLVLFV SRLVPRKGAH IVIDAVAQLH RPVELHVVGD GRSRSALEQR ARRRGILAVF
EGRVALDRLV ASYQAADVVA FPAHDRWFGL EEEGFGIVAL EAQACGVPVV VGVSGGTAEA
VDPASGRLVA SRRPRAWAEA IEERLAHTSP PVADARGFVE RHHGYDRLAD EWHAGLERLA
SRGRTAGSG