Gene Afer_0759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0759 
Symbol 
ID8322819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp769322 
End bp769930 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID644951892 
ProductSNARE associated Golgi protein 
Protein accessionYP_003109380 
Protein GI256371556 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.259781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCACC TGATCGACTC GCTGGTGTCT CGCGATGGCT TGATCGCCAT CGTCGTTCTC 
ATGACGCTCG AGTCTGCGCT GATCCCGGTG CCCTCGGAGC TCGTGATGTC GCTTGCCGGC 
TTCTTTGCCT ACGAGGGGCA TCTCAGCCTC GTCGGCGCGA TGGTGGCGGG CGTCGTCGGC 
AACGTGGTTG GTTCCGTCGT GCTGTGGGTC ATCGGCCGTA CCGGTGGGCG CGCTCTCGTC 
GAGCGCTTCG GGCGCTACGT TCTCCTCAAG CCTCGAGACC TCGATCGCGC GGAGCGTTGG 
TTCGCCAAGC ACGGCGAGTC GGCAGTGATC GTCTCGCGAC TGCTGCCGGT GGTCCGATCG 
GTGATTTCCT TGCCTGCGGG AGTGGCAGAG ATGCGGGTGG GGCGTTTCAC GCTGTTCACG 
CTGATCGGTT CGATCCCGTT CGTCGTGGCG CTCACGCTTG CCGGCTATTT CCTCGGGAGC 
AGCTACGAGA CGATCGTGCG CATCGTCCAG GACTTTGGCT ACCTCGCTGC CGTCGCGATC 
GTGCTCGCCG TGGTCGCCTT CGTGGTGGCA CGGGCGAGGG CTCGACGCCG TGGGGCCGAG 
GCGGCCTGA
 
Protein sequence
MTHLIDSLVS RDGLIAIVVL MTLESALIPV PSELVMSLAG FFAYEGHLSL VGAMVAGVVG 
NVVGSVVLWV IGRTGGRALV ERFGRYVLLK PRDLDRAERW FAKHGESAVI VSRLLPVVRS 
VISLPAGVAE MRVGRFTLFT LIGSIPFVVA LTLAGYFLGS SYETIVRIVQ DFGYLAAVAI 
VLAVVAFVVA RARARRRGAE AA