| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0700 |
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| Symbol | |
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| ID | 8322760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 706139 |
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| End bp | 707404 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951835 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_003109323 |
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| Protein GI | 256371499 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCGCT TGGCACCGGT GTGGAGCAAG GTGTCGCCGA TCACGGTCAC GCATGGCCGA
GGCGCGCGTG TGTGGGATAC GAACGGTCAG GCATGGCTTG ACATGACGGC TGGGATCGCC
GTGACCTCGA CGGGTCACGC GCATCCCAAG GTCGCCGAAG CCATCGCTCG TCAGGCCGAG
CGCTTCATCC ACGCGCAGGT GAACATCTAC ACTCACGACC TCTTGCAACC GCTCGCCGAT
GCCCTCGATG CGATCACGCC CGACGGTATC GACACATTCT TCTTCTCGAA CTCGGGTGCA
GAGGCAACCG AGGCGGCCGT CAAGCTGGCT CGCCAGGCGA CCAAGCGCCC CAACGTCATC
GTGTTCCAGG GGAGCTTTCA TGGCCGCACC GCCCAGGCGA TGGCCATGAC GACCTCGCGC
ACCGGGTACC GGGCCGGCTA CATGCCGCTG CCCGCTGGCG TCTTCGTCTC GCTGTTCCCT
GGCTTCCCGC GCTCGAGTCG GGTGGGTGAC GAGGTGAGTG TGGACGAGGC ACTCGACTAC
CTCGACTACC TGCTCGCGTC GCAGACGGCG CCGGCCGAGA CCGCCGCCGT GGTGATCGAG
CCGGTGCTCG GCGAGGGAGG CTACATCCCG GCGCCGGCGG CGTTCCTCAC CGGCGTCGTC
GAACGCGCCC GGGCGCACGG CATCGTGTTC GTCGCCGATG AGGTGCAGAC CGGTTTTGGT
CGTACCGGGC GGATGTTCGC CGTCGAGCAC GCCAACGTCA CGCCGGACAT CCTCGTGATG
GCGAAGGGTA TCGCGTCGGG ATTTCCCTTC TCGGGGATCG GAGCATCGTG GGAGCTGATG
GAGCGCTGGC CGGTCGGGAG CCACGGAGGA ACCTATGGCG GCAACCCCAT GGGCGTCGCG
GCGGCGCTCG CGACCATCCA GGTGATCCAG GAGGAGGGGC TCGTCGACAA TGCGGCTCGA
CGTGGCGCCC AGCTGCAGGC GTCGATGGAG CGCATCGCCG AGAAGTTCGA GTGCGTGAGC
CGAGTTCGTG GCCTCGGGCT GATGGTCGGT GTCGAGCTTC GTGACGACGC GGGGCGGCCC
GATGCGGACC TCGTCGGCCG AGTGCTCGCC GAGATGCAGG CGAGCCACCG CGTGCTCGCG
ATGAGTGCTG GCACCTTCGG CAACATCATC CGCTGGATGC CCCCGCTCGT GGTGAGCGAG
GCCGAGATCG ACGAGGCCGC CGCCGCGTTC GAGGCGTCGC TGGCCCACGT GCTCGCACAG
CGGTAG
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| Protein sequence | MGRLAPVWSK VSPITVTHGR GARVWDTNGQ AWLDMTAGIA VTSTGHAHPK VAEAIARQAE
RFIHAQVNIY THDLLQPLAD ALDAITPDGI DTFFFSNSGA EATEAAVKLA RQATKRPNVI
VFQGSFHGRT AQAMAMTTSR TGYRAGYMPL PAGVFVSLFP GFPRSSRVGD EVSVDEALDY
LDYLLASQTA PAETAAVVIE PVLGEGGYIP APAAFLTGVV ERARAHGIVF VADEVQTGFG
RTGRMFAVEH ANVTPDILVM AKGIASGFPF SGIGASWELM ERWPVGSHGG TYGGNPMGVA
AALATIQVIQ EEGLVDNAAR RGAQLQASME RIAEKFECVS RVRGLGLMVG VELRDDAGRP
DADLVGRVLA EMQASHRVLA MSAGTFGNII RWMPPLVVSE AEIDEAAAAF EASLAHVLAQ
R
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