Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0638 |
Symbol | |
ID | 8322698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 643567 |
End bp | 646224 |
Gene Length | 2658 bp |
Protein Length | 885 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644951777 |
Product | translation initiation factor IF-2 |
Protein accession | YP_003109265 |
Protein GI | 256371441 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.268252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGTCCGC ATCGGTTCGG AGGCAAGGGC AACCAGTTGG CGCGCAAGCT CAGAGTGTAC GAAATCGCGA AGGAACTCGG TCTCTCCAAC AAGGAGGCGC TGGATCTGTG CCTCGCGTTG GGCGTGGACG TGAAGAACCA CTCCTCGAGC GTCGAGGAGG CCCATGCAGA CCGGATCCGA CGTCGCGCGC AGCGAGATCA TCTCGGCATC TACGCCGAGG CAACGACCCC CCAGGTGGCC CCGCCGAGCG CGCCGACCAC GCCACCGAGC GTTCGTGAGC CCGAGCCGGT GGCGGCTCCC GAGATATCGG AGCCGGTCGT GGCGAGCGCA CCCGAGCGGC GCCCCGACCT CGCCGCGGTG ATCGCCGAAG AGGCGGCCAA GCGCGAAGAG GCCGAGCAGG CTGCCATCGA GAACGCGGGT CGAGCGCCGG AGCAGGCGGC GCCGCGACGT CAGGGCCCGC TCTCGCCATC GGGGAATCCG ATCCCACCAC CCCCGGGCGG GCGACCGCTG TCGCCGTCGG GTAAGCCGAT CCCTCCGCCA CCACGTCCAC AAGGTCCACG CGACGGACGC GGCCGACCGG CTCGCGAGGG GTCCGGGCGC CCTGTGGGCG GGTCGCGTCC GGGTGCCGGG CGCCCCGGAA CCGGTGGCGG GCGCCCCCCG ATGGGGGGTG GGATCCGGCC GCCGGCCCGC GGTGGCGGCG GCGTCAGCAC GCCCCGATTC GGGGGCGCAG CCGGTGCGTT CGCTGGCCGT CCCGGTGGCG GTCGGGGCCG TGGCGTGCGT CCGAACAAGA GTCGGCGGCG CATCTCGCGC AAGGAGTTCG AGGAGCTCGA GCCGACCCGA GCGACGGCCT ATGTCCCGTC GAACGATCCG GTCCCTGACT ACGAGGTCAT CATCGAGCGG GGCTCGACGG CCCAAGAGGT TGCCCCCAAG CTCAACCGCT CGCCGGGCGA CCTCGTGCGC TTCTTGCTCA TGCAGGGCGA GATGGTCACG GCGACCCAGA GCCTCACCGA CGAGATGATC GAGCTGTACG CGGCGGAGCT GGGCGCGAAG GTGCGCCTCG TCGATCCCGG GCAAGAGCAA GAAGCGCAGC TCGCCGCCAA GTATCTCGAT GTCGATGAGA CCCTCGATCC GACGGCCGAG GTGGTCCGCC CTCCCGTCGT CACGGTCATG GGGCACGTCG ACCACGGCAA GACGTTGCTG CTCGATCGCA TTCGCCACAC GAACGTCGTG GCGGGCGAGG CCGGTGGCAT CACCCAGCAC ATCGGTGCCT ACCAGGTCGA TGTCGAGGGG GGTCGCATCA CCTTCATCGA CACCCCTGGT CACGAGGCCT TCACGGCGAT GCGTGCGCGT GGCGCGAGCG TCACGGACAT CGTCATCTTG GTCGTCGCGG CCGACGACGG TGTCATGCCC CAGACCGTGG AGGCCATCAA CCACGCCAAG GCGGCGGGCG TGCCGATCAT CGTCGCGATC AACAAGATCG ACCGTCCTGA CGCGGATCCG AATCGGGTCA TGCAGCAGCT CTCCGAGCAC GGCCTCGTGC CCGAGGCCTG GGGTGGCGAC ACCATCACGG TGCAGGTGTC GGCGCTGCAG AGTCTCGGGA TCGACGAGCT GCTCGAGCAG GTGCTCGTGC TGGCCGAGGT CCTCGAGCTG CGTGCCAACC CGACGGGTCG GGCTCGCGGT GTGGTGCTCG AGGGACACCT CGACGTCGGT CGTGGTCCGG TCGCAACCGT GTTGGTGCAG GGCGGCACCC TGCACGTCGG TGATCCCGTG GTCGCCGGCC AGGCATGGGG CAAGGCCAAG GCGCTCATCA GCGATCGGGG AGAGAAGGTC TCCGATGCCG GCCCGTCGAC GCCGGTCCAG GTCCTCGGGT TCTCGGAGGT GCCGAGCGCG GGTGATCCGT TCCGCGTGAC GGCCGAGATC TCGCACGCCA GGGAGATCGG CGAAGCGCGC GAGCAGCGGC TGCGGTTGGC GGCGAACGCC AACCGGGCGG TCGGCGCACA GGGCGTGCGG CTCGAGGACA TCTTCGAACA GATCCAACAA GGCGAGGTCC CTACCCTCAA CCTCATCGTC AAGGCCGACG TCCAGGGCAG CCTCGAGGCG CTCTCGGATG CGCTCGCGAA GCTCTCGCGC GACGAGGTGC GACTCGAGAT CATCCACAAG GCCGTCGGTG GGATCACCGA GAACGACGTC ACGCTCGCGG CGGCGTCGCA CGCACTCATC ATCGGGTTCA ACGTCCGGCC GGATCGCCGA GCGCGTGAGG CCGCCGAGGT CCGTCACGTG GAGATCCGTA CCTACGAGAT CATCTACCAG GTGATCGAGG ACATCGAGGC GGCCGTGGTC GGCATGCTCA AGCCGGAGTT CGAGGAGGTG GTCGTCGGCG AGGCCGAGGT TCGCGAGGTC TTCCGGATCC CGCGCGTCGG TGCCGTCGCA GGGTGCTACG TGCGCAACGG AACCTTGACC CGTGGTGGCC GCGTGCGATT CCTCCGAGAC GGGGTCGTGC TGTGGAAGGG GACGATCTCC TCGCTGCGCC GCTTCAAGGA GGACGTGCGC GAGGTCCAGG CCGGGTTCGA GTGCGGCGTT GGGCTCTCCG ATTTCCAGGA CCTCCATGCA GGCGACATCA TCGAGGCGTT CGAGCTGCGT GAAATCCCGC GGGGGTGA
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Protein sequence | MGPHRFGGKG NQLARKLRVY EIAKELGLSN KEALDLCLAL GVDVKNHSSS VEEAHADRIR RRAQRDHLGI YAEATTPQVA PPSAPTTPPS VREPEPVAAP EISEPVVASA PERRPDLAAV IAEEAAKREE AEQAAIENAG RAPEQAAPRR QGPLSPSGNP IPPPPGGRPL SPSGKPIPPP PRPQGPRDGR GRPAREGSGR PVGGSRPGAG RPGTGGGRPP MGGGIRPPAR GGGGVSTPRF GGAAGAFAGR PGGGRGRGVR PNKSRRRISR KEFEELEPTR ATAYVPSNDP VPDYEVIIER GSTAQEVAPK LNRSPGDLVR FLLMQGEMVT ATQSLTDEMI ELYAAELGAK VRLVDPGQEQ EAQLAAKYLD VDETLDPTAE VVRPPVVTVM GHVDHGKTLL LDRIRHTNVV AGEAGGITQH IGAYQVDVEG GRITFIDTPG HEAFTAMRAR GASVTDIVIL VVAADDGVMP QTVEAINHAK AAGVPIIVAI NKIDRPDADP NRVMQQLSEH GLVPEAWGGD TITVQVSALQ SLGIDELLEQ VLVLAEVLEL RANPTGRARG VVLEGHLDVG RGPVATVLVQ GGTLHVGDPV VAGQAWGKAK ALISDRGEKV SDAGPSTPVQ VLGFSEVPSA GDPFRVTAEI SHAREIGEAR EQRLRLAANA NRAVGAQGVR LEDIFEQIQQ GEVPTLNLIV KADVQGSLEA LSDALAKLSR DEVRLEIIHK AVGGITENDV TLAAASHALI IGFNVRPDRR AREAAEVRHV EIRTYEIIYQ VIEDIEAAVV GMLKPEFEEV VVGEAEVREV FRIPRVGAVA GCYVRNGTLT RGGRVRFLRD GVVLWKGTIS SLRRFKEDVR EVQAGFECGV GLSDFQDLHA GDIIEAFELR EIPRG
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