Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0575 |
Symbol | |
ID | 8322634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 579326 |
End bp | 580690 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644951713 |
Product | hypothetical protein |
Protein accession | YP_003109202 |
Protein GI | 256371378 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.088547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGC AGCACGACCT GTCGGACGTG GCCCGTCGGC ACCTGTGGAT GCACTTCACC CGCATGGCGT CGTACGACGA GCACGAGGTG CCGGTGATGG TCCGGGGCCA GGGCCCCTAC GTGTGGGATT CGAAGGGCAA GCGCTACCTC GATGGGCTCG CTGGCCTGTT CGTGGTCCAG GTAGGGCACG GTCGTACCGA GCTTGCGGAG GCCGCCTCGA AGCAGGCGAG CGAGCTTGCC TACTTCCCGT TGTGGAGCTA CGCCCACCAG CCAGCGGTCG AACTCGCCGA GCGCCTTGCG GCATTGGCCC CCGGTGACAT CAACCGCGTG TTCTTCACGA CCGGTGGCTC TGAGGCCGTC GAATCTGCAT GGAAGCTCGC GCGGCAGTAC TTCAAGCTCA CCGGGCAGCC GACCAAGACG AAGGTGATCT CGCGGAACCT CGCCTACCAC GGCACCTCGA TGGGTGCGTT GTCGATCACC GGCCTACCGG GGATCAAGAC CCCGTTCGAG CCCTTGGTCC CCGGGTCTAT CAAGGTGGAC AACACCAACC ATTACCGCTG TGTGCACTGC AGTGCGGCCG AGACCTGTTC GCTCGCGTGT GCTGACGACA TCGAGCAGCG AATCCTGATG GAGGGCCCCG AGACCGTCGC GGCGGTGTTC CTCGAGCCCG TCCAGAACGC GGGCGGGTGC TTCACGCCGG CGCCGGGGTA CTTCGAGCGG GTTCGGGAGA TCTGCGACCG CTACGACGTG TTGCTCGTCT CGGACGAGGT CATCACTGGG TTCGGACGAC TCGGCGAGTG GTTCGGCGCG ATCCGCTACG ACTACCAGCC CGACATCATC ACCTGCGCCA AGGGGATGAC GTCTGGGTAC TCCCCGATCG GGGCGATGCT CGTGTCGGAC CGGTTGATGG AGCCGTTCTT GCATGACACG ACGACGTTCC TCCACGGGAT CACGTTCGCT GGACATCCGG TCTCGGCGGC GGTCGGGCTC GCCAACCTCG ACATCTTCGA GCGCGAAGGT CTCCTCGACC ACGTCCGTCG CAACGAGCCG CTGTTCCGGG CACAGCTCGA CACCCTGCTC GATCTGCCGA TCGTCGGTGA GATTCGCGGT GCTGGTTACT TCTACGGCAT CGAACTCGTC AAGGATCGCG CCACGCGCGA GACCTTCGAC GACGACGAAT CCGAGCGACT GCTGCGTGGT ATCCTCACCC CGACGCTCTT CGAGCTCGGC CTCATCTGTC GAGCGGACGA TCGGGGCGAT CCGGTCGTGC AGCTCTCGCC GCCACTCGTT GCGGGCCCGG AGCAGTTCGA GGAGATCGTC GCGATCTTGC GGGAGGCGTT CGAGCGCGCT TGGGCTGCGC TGTGA
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Protein sequence | MSEQHDLSDV ARRHLWMHFT RMASYDEHEV PVMVRGQGPY VWDSKGKRYL DGLAGLFVVQ VGHGRTELAE AASKQASELA YFPLWSYAHQ PAVELAERLA ALAPGDINRV FFTTGGSEAV ESAWKLARQY FKLTGQPTKT KVISRNLAYH GTSMGALSIT GLPGIKTPFE PLVPGSIKVD NTNHYRCVHC SAAETCSLAC ADDIEQRILM EGPETVAAVF LEPVQNAGGC FTPAPGYFER VREICDRYDV LLVSDEVITG FGRLGEWFGA IRYDYQPDII TCAKGMTSGY SPIGAMLVSD RLMEPFLHDT TTFLHGITFA GHPVSAAVGL ANLDIFEREG LLDHVRRNEP LFRAQLDTLL DLPIVGEIRG AGYFYGIELV KDRATRETFD DDESERLLRG ILTPTLFELG LICRADDRGD PVVQLSPPLV AGPEQFEEIV AILREAFERA WAAL
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