Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0528 |
Symbol | |
ID | 8322587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 532367 |
End bp | 533167 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644951673 |
Product | hydrolase, TatD family |
Protein accession | YP_003109162 |
Protein GI | 256371338 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0564834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCGG GCTGGATCGA TGCGCACGCC CATCCCGAGC GCGTGAGCCT CGACGAGGAG CTGGCGCTCC TCGTCGACGC CGGGGTCGTC GGGTTCGTCG CGATCGGGAC GGACCCTGCG AGCTCGCAAG AAGCGGCCCG TATCGCCGAC CAGCTCGCCA CCGAACGGCT CGACCTCAGC GTCGGCGCGA CGATCGGCAT CCATCCCCAC GATGCCGAGG CGCACGGTGG CGCGATCGCC GACCTCGCCG CGCTCGTCGT CGAGTACCCG GGCATCGTCG TCGGGGTGGG CGAATGCGGG CTCGACTACC ACTACGACTA CTCGCCGCGC CCCGTCCAGC GGCGCGTCTT CGCCGAGCAG GTCGCCCTCG CCCACCGCCT CGGGCTCGCC CTCGTGGTCC ACACGCGCGA AGCCTGGGCC GACACCGAGG CCATCCTCGA CGACGCCCCG AGTCCGCCAG CGGTCATCAT CCACTCGTTC TCGGAAGGTC CCGACGAGGC CGAGCGCGCC CTCGCACGCG GCTGGTACCT GTCGTTCTCG GGGATCGTGA CCTTCAAGAA CGCCCAGCCC GTTCGCGAGG CGCTTCGGCT CGCCCCGATC GAGCGGCTGC TCGTCGAGAC CGATACGCCC TTCCTCGCGC CGGTCCCGCT CCGCGGCCGA CCCAACCACA TCGCCAACGT CGCCGTCACG GGACGCTTCG TGGCCAGCGA GAAGGGAGTC GACGCCGACC GGCTCGCGGC GATCACCGCG GCGACGACAC GGCGGCTCTT CGGGCTCCGT GAGGTCGAGC CATCTCCCTG A
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Protein sequence | MSAGWIDAHA HPERVSLDEE LALLVDAGVV GFVAIGTDPA SSQEAARIAD QLATERLDLS VGATIGIHPH DAEAHGGAIA DLAALVVEYP GIVVGVGECG LDYHYDYSPR PVQRRVFAEQ VALAHRLGLA LVVHTREAWA DTEAILDDAP SPPAVIIHSF SEGPDEAERA LARGWYLSFS GIVTFKNAQP VREALRLAPI ERLLVETDTP FLAPVPLRGR PNHIANVAVT GRFVASEKGV DADRLAAITA ATTRRLFGLR EVEPSP
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