| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0461 |
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| Symbol | |
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| ID | 8322520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 459473 |
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| End bp | 461620 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644951613 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003109102 |
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| Protein GI | 256371278 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGAGG AGCTCCTCGA GGATCTGAAC CCCTCGCAGC GAGAGGCGGT CAGCGCTCCG
ATCGGACCGG TGCTCGTGCT CGCAGGGGCC GGCTCGGGCA AGACGAGGGT GCTGACGCGC
CGCGTCGCCT GGCTGCTCGC CGCTGGCGAG CGGCCGTCGT CGATCCTCGC GATCACCTTC
ACCAACAAGG CAGCCGGGGA GATGGCCGAG CGCGTCCGCA GTCTTGTTGG ACCCAACGCG
GATGGCTTGT GGGTCTCGAC GTTCCACGCC GCGTGCGCGC GGATGCTCCG GCTGCACCCC
GAACTCGGGG GTTTGCGCTC TGGCTGGAGC ATCTATGACC AAGACGATGC GAGGCGGTTG
CTCGAGCGGA CCATTCGACG CTTGGACCTC GACACCAAGC GGTTCCCACC GCGGGCGATC
GCCCAGCAGG TGTCGCTCGC CAAGGCTCGG CTCGTCGACC CGGAGCGTTT CACCGACGAG
GCGGAGGGGC TCTACGAGCG CCAGGTCGCC ATGGTCTATC GGTCCTACCA GGCCGCGCTT
GCCGAGGCGA ACGCGGCCGA CTTCGACGAT CTGATCGGAC TCGTCGTCGA GGGTCTCGCG
ACGCGACCGG AGCTCGCCGA GCATTGGCGA CGTCGGTTCC GCCACGTCCT CATCGACGAG
TACCAGGATG CGAACCCGGC CCAGCACGCC TTCGTCGCCG AGCTCGTCGG TCGTAGCGGG
AGCGTGTTCG CCGTCGGCGA CGTCGATCAG TCGATCTACG CCTTCCGCGG TGCGGATCCC
TCTGGTGTCC TCACGTTCGA GGAGCGCTTC GACGGCGCGA AGGTCGTCAC GCTCGAGCAG
AACTATCGCT CGACCAACGC CATCTTGGGG CTCGCCAACG CGGTGATCGC CAAGAACCGT
CGTCGCTACG CCAAGCACCT GTTCTCCGAG CTCGGCGAGG GCACGCCGGC GCGACGCTAT
CAGGCCACCG ACGAGCGGGA CGAGGCCCGT TGGGTGGCCG CGACCGTACG AGAGTTCCTC
CAACGTGGCG GCGTCGATCC CAGCGAGATT GCGGTCATCT TTCGCACCAA TGCGCAGAGT
CGTCCGCTCG AAGAAGCCTT CTCGGAGGCG GGCATCCCGT TCCGCGTGGT CGGAGGCGTC
CGTTTCTACG AGCGCCGCGA GGTGCGTGAT CTGCTCGCCT ACCTGAGAGT CCTCGCCAAC
CCGGACGACG ACGTCGCGCT GGCGCGGATT CTGAACGTGC CACGGCGCGG GATCGGCCGG
GGCACCGAGG AGGCGCTCCA GGCGGCTGCG GCACTGCGCG GTCGGAGCAT GCTGTCGCTG
CTGCGTGCAG AGGGCGTCGA GGTGCTCGGT CTGACGAGCC GCCAGGAGCG GGCCCTGCGA
GGGTTCGTCG AGCTCATCGA TCGCCTGGGA GCGCTTGCGT CGCTCCATCG ACCGAGCGAG
CTGATCGACG CGGTCGTCGC CGAGACGAGC TACCTCGAGC ACCTCAACGA GGAGGATCCG
ATCACCCTCG AGGGTCGCCT CGAGAACATC GCCGAACTGC GTGCCTCGGC GGCGGAGGCT
GACGATCTCG AGAGCTTCCT GGAGCGCGCC GCGCTCGTGT CGGCGGTCGA CGAGGTGATG
GGTGCCTCGG GCGTCACCCT CTTGACGGCG CACGCCGCCA AGGGTCTGGA GTTCGACGTC
GTGGTGGTCG TGGGACTCGA GGAGGGGGTC TTTCCCCACG TGCGTGCCAT CGTCGATGCC
GAGGCGGTCG AGGAGGAGCG TCGACTGTTC TACGTCGCCA TGACCCGAGC ACGCACGACG
CTCGTTCTCA CGAGCGCGAG GCGCCGGGCG AGCTGGGGCG AGCCGCTCTA CAACCCACCC
AGTCGCTTTC TCGACGAGCT GCCGGCTGAT CTCGTGGCGA CGACCGCGGC GCCCGTCGCT
GTCGGGACGG CGTGTGCGGA GTCGATCCAA CGTGCGAGTG CGGTCGTCGA AGCCCGTGCA
GCCCGGAGCG AGTGGGTGGT AGGCGATCGA GTCTTCCACG CTCGCTACGG CGAGGGAACC
ATCAGACGGG TCGTGCCGCG GGGCGTCGAC GACGAGCTCG TGATCGCGTT CCACGGCGCT
GGCGAGCGTC GCTTCTTCGC CTCGATGGTC AAGCTACGAC GCGCGTGA
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| Protein sequence | MLEELLEDLN PSQREAVSAP IGPVLVLAGA GSGKTRVLTR RVAWLLAAGE RPSSILAITF
TNKAAGEMAE RVRSLVGPNA DGLWVSTFHA ACARMLRLHP ELGGLRSGWS IYDQDDARRL
LERTIRRLDL DTKRFPPRAI AQQVSLAKAR LVDPERFTDE AEGLYERQVA MVYRSYQAAL
AEANAADFDD LIGLVVEGLA TRPELAEHWR RRFRHVLIDE YQDANPAQHA FVAELVGRSG
SVFAVGDVDQ SIYAFRGADP SGVLTFEERF DGAKVVTLEQ NYRSTNAILG LANAVIAKNR
RRYAKHLFSE LGEGTPARRY QATDERDEAR WVAATVREFL QRGGVDPSEI AVIFRTNAQS
RPLEEAFSEA GIPFRVVGGV RFYERREVRD LLAYLRVLAN PDDDVALARI LNVPRRGIGR
GTEEALQAAA ALRGRSMLSL LRAEGVEVLG LTSRQERALR GFVELIDRLG ALASLHRPSE
LIDAVVAETS YLEHLNEEDP ITLEGRLENI AELRASAAEA DDLESFLERA ALVSAVDEVM
GASGVTLLTA HAAKGLEFDV VVVVGLEEGV FPHVRAIVDA EAVEEERRLF YVAMTRARTT
LVLTSARRRA SWGEPLYNPP SRFLDELPAD LVATTAAPVA VGTACAESIQ RASAVVEARA
ARSEWVVGDR VFHARYGEGT IRRVVPRGVD DELVIAFHGA GERRFFASMV KLRRA
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