Gene Afer_0405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0405 
Symbol 
ID8322464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp416456 
End bp416893 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID644951557 
Productribosomal protein L16 
Protein accessionYP_003109046 
Protein GI256371222 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR01164] ribosomal protein L16, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATGC CACGCAAGGT GAAGCACCGC AAAGTCCAGC GGGGACGGCT CGGCGGAGAG 
GCCAAGGGTG GTACCGAGAT CACCTTCGGT CGCTACGGTA TCCAGGCCCT CGAGCCAGCG 
TGGGTGACGG CTCGCCAGAT CGAGGCCGCG CGTATCGCGA TGACGCGGCA CGTGCGTCGC 
GGTGGCAAGG TCTGGATTCG CATCTTCCCG GACAAGCCCA TCACCAAGAA GCCGGCTGAG 
ACTCGGATGG GTTCGGGCAA GGGCAACCCG GAGTTCTGGG TCGCGGTGGT CAAGCCTGGG 
CGCATTCTCT TCGAGCTCGA CGGCGTGGGC GAGGAGCTCG CCCGTGCCGC CATGGAGCGC 
GCGATCCAGA AGCTGCCGAT GAAGGCACGC TTCGTGGTGC GCGAGGACGT GGAAGCGTTG 
GCGGGAGGCG CCAGATGA
 
Protein sequence
MLMPRKVKHR KVQRGRLGGE AKGGTEITFG RYGIQALEPA WVTARQIEAA RIAMTRHVRR 
GGKVWIRIFP DKPITKKPAE TRMGSGKGNP EFWVAVVKPG RILFELDGVG EELARAAMER 
AIQKLPMKAR FVVREDVEAL AGGAR