Gene Afer_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0274 
Symbol 
ID8322328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand+ 
Start bp282415 
End bp283032 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content69% 
IMG OID644951422 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003108916 
Protein GI256371092 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.64998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGCTC CACGCTTTCC GATCGGCGAG CGGCTGCGCC ATGCTCGCGA GCAACGGGGT 
CTCTCCCTGG CCGCAGTTGC CGAGCGCACT GGCCTGTCGA AGGGGTTCCT CTCGCGGGTC 
GAGCGCGACG GGGTGAGCCC GTCCATCGAC TCGTTGGTCG CGATCGCCGA TGCCGTCGGG 
CTCGCCGTCG CGGACGTCTT TGCGGTGGCA CCGGTGGTGG TTTCACGCTC CGTCGATCGC 
TTCCCCGATG GACTGCCTGG CGAGGGAGTC CGGGACACGT TGCTCTCCCC ACCCGACGAT 
CGGCGCGTTA CCGTTCTCGA GACGGTCGCG GCACCCGGAG GGAGCGGCGG TGACGAGCTC 
TATCACCTGC CATCGCAGGT GGAACTTTGC TACGTGGTCG CCGGTCGTAT CGAACTCGTT 
TTCGCGAGCG AGTGCTACAC CCTCGATGCG GGTGACTCGG CGACCTTCGC TGCCGACGCA 
GCCCACACAT GGCGCAACCT CGGCGACGGC GAGGCCCGGG TGCTCTGGGT GCTCGCACCG 
GCCCTTCGGG ATCCCTGGAC AGCCAAGGAG CGCCGCGACG ACGGTTCGGT CGCGGACGTG 
CAGGGCGAAC GTGTCTAG
 
Protein sequence
MQAPRFPIGE RLRHAREQRG LSLAAVAERT GLSKGFLSRV ERDGVSPSID SLVAIADAVG 
LAVADVFAVA PVVVSRSVDR FPDGLPGEGV RDTLLSPPDD RRVTVLETVA APGGSGGDEL 
YHLPSQVELC YVVAGRIELV FASECYTLDA GDSATFAADA AHTWRNLGDG EARVLWVLAP 
ALRDPWTAKE RRDDGSVADV QGERV