Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_0145 |
Symbol | |
ID | 8322198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 155129 |
End bp | 156424 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644951292 |
Product | protein of unknown function DUF1078 domain protein |
Protein accession | YP_003108787 |
Protein GI | 256370963 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAGT CGCTCTCGTC TGCGATCTCC GGGATCGAGG CGAACCAGGA ATGGCTCGAC AACATCGCGA ATAACATCGC CAACGCCAAT ACGACCGGCT ATCAGTCGAC CCAGACGGAG TTCGCAGACC TGCTCTATCA GCAGCAGTCG GCAGCCGGCG GACCGGTGCC GGGCCAGACC GGAGGGACGA ATCCACTGGT GGTCGGCTCC GGTGTCCGGG TGTCGGCGAC GCCAACCGAC TTCTCTCAGG GCACGATCGT GCAAACCGGT ACCTCCACCG ACGTCGCCAT CCAGGGCCAA GGCTTCCTCG TCGTCAACCA GGGTGGCCAG AACTACTACA CCCGTGACGG GGCGCTCCAG CTCGACGGCG CTGGTCAGCT CGTCACGGCC TCGGGTGCGC TCGTGATGGG ATGGGTCCCC AACGCGGCCG GTCAGGTGAA CCAGAACGCT CCGCTCGCCG CGCTCACGAT TCCGCAGGGC CAAGTTGCCC AGCCGGTCGC CACGAGCACC ATCACGCTCG GTGGGAACCT CCCGGCAGGT TCGTCCAACC CGGTCGTCGT GACGACGACC GGCTACGACG ACCTCGGTAA CCCGGTGCCG ATTCAGCTCA CCTTTACGCC GTCGACGACC GCCAACCAGT GGACACTCAC GGCCGAGACG ACGCCGCCGG GCGCGACCTC GCCCGTGGCG CTGACTGTCG GCGGCGCCTC CTCGCAGACG GTGACCTTCG ACCCCGCGAC CGGACAGATC AGCGCCATCT CCGGGACCTC GACCGCGAAC CCTGATCAAC TGGCGCTCGG TGGGTTCCCC ACGTCGTACG ATCTGCCGGC TGGCTACGCC ATGAACCTCG ACTTCCCGAC CCCTGGCACG GCACAAGCCG TGACCCAGTT CGCCGCCAGC TCTCCAACGG CCCAGGTGAC GAACCAGAAC GGGTACCCAT CGGGAGCCCT CGCAGGCTTC ACCATCGGCT CCGATGGCGT GATCGAGGGC ACCTATGCCA ACGGTCGCAC CCAGGTGCTC GGCCAGATCG CACTGGCGCA GTTCGCGAAC GCGCAGGGGC TCTCCAAGCA GGGCAACCTC CTGTACGCAG CGACGACCAA CTCCGGTGCG CCCCAGCTCG GATCCCCGGG TGCCGCGGGT CTGGGCCAGC TCGTCGGAGG TGCGCTCGAG TCGTCGAACG TCTCCATCGG CTCCGAACTG ACCAACTTGG TCGTCGCACA GACCGATTAC CAGGCCAATA CGAAGGTCGT CCAGACGACG GCCACGGTGC TCCAGAGCTT GGTGCAGATG GCCTAG
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Protein sequence | MTKSLSSAIS GIEANQEWLD NIANNIANAN TTGYQSTQTE FADLLYQQQS AAGGPVPGQT GGTNPLVVGS GVRVSATPTD FSQGTIVQTG TSTDVAIQGQ GFLVVNQGGQ NYYTRDGALQ LDGAGQLVTA SGALVMGWVP NAAGQVNQNA PLAALTIPQG QVAQPVATST ITLGGNLPAG SSNPVVVTTT GYDDLGNPVP IQLTFTPSTT ANQWTLTAET TPPGATSPVA LTVGGASSQT VTFDPATGQI SAISGTSTAN PDQLALGGFP TSYDLPAGYA MNLDFPTPGT AQAVTQFAAS SPTAQVTNQN GYPSGALAGF TIGSDGVIEG TYANGRTQVL GQIALAQFAN AQGLSKQGNL LYAATTNSGA PQLGSPGAAG LGQLVGGALE SSNVSIGSEL TNLVVAQTDY QANTKVVQTT ATVLQSLVQM A
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