Gene Afer_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_0043 
Symbol 
ID8322090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp43545 
End bp43952 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID644951191 
Productribosomal protein S18 
Protein accessionYP_003108691 
Protein GI256370867 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0238] Ribosomal protein S18 
TIGRFAM ID[TIGR00165] ribosomal protein S18 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAGA CAGCGACCAA GCGCAAGCGT CGGGGCCGCG AGGCACCCGA GACCAAGCGC 
ATCAAGAAGA AGCCCTGCGT TTTCTGCCAG CAGCACGTGG ACTGGGTCGA CTACAAGGAC
GTCGATCTCC TGCGTCGTTT CACGTCGGAG CGAGCCAAGA TCCGCGCCCG GCGGGTCACG
GGTAACTGTG CCCAGCACCA AGCCGACGTC GCCAACGCCA TCAAGGTGGC GCGCGAGCTC
GCACTGCTGC CCTACGTGAT CCGTCCGGTC TCCGACCGAA GCCGCCGCAA CCAGGGCGAC
CAGCCCGTCG GTGACCGCGA GCTGCGCTCG CGGAACCGCG CCCAGGCCAC CGACCGCACC
AGCGCCGACG AGGAAGAGAC GCCAGCAGCC GAGGAGGAAC AGGCATGA
 
Protein sequence
MPKTATKRKR RGREAPETKR IKKKPCVFCQ QHVDWVDYKD VDLLRRFTSE RAKIRARRVT 
GNCAQHQADV ANAIKVAREL ALLPYVIRPV SDRSRRNQGD QPVGDRELRS RNRAQATDRT
SADEEETPAA EEEQA