Gene Adeh_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeh_4123 
Symbol 
ID3887049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-C 
KingdomBacteria 
Replicon accessionNC_007760 
Strand
Start bp4744922 
End bp4746193 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content79% 
IMG OID637865681 
Producthomospermidine synthase-like 
Protein accessionYP_467324 
Protein GI86160539 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5310] Homospermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCGTT CCGTCGGTCC CCGCGGCACC GCGCTGCTGG TCGGCGCCGC CGGCGGCGTC 
GCCCGCGCCC TGCTCTCCGT GCTCGCCTCG ACGCCGCTCG GCCGCGCGCT CGCCGCGCGC
CTCGACGCGC TGCTGCTCGT GGACGCGCGG CCGCTCCCGC CCGGCCCGCT GCCGCCGATC
GCGCGGCCGC TCCCGCAGGC CGGGATCCGG CACGCCGACG ACCTGGCGCG CCTGGTGCGC
GACCACGGCG TGGACCAGGT GGTGGACCTG TCCTCGCTCG ACACGCTCGA CGCCATCCGC
GCCTGCGACG CGGCCGGCGC GAGCTACCTC GACACCAGCC TGGAGCACTG GCCCGGGGAG
GCGCCCCGCG CCTGGGAGTC GCTCGTGCTG CGCGCGATGC CTCCCGCGCG GCCGGCGCTG
CGGCGCGGGA GCTTCCTCGT GGGGAGCGGC ATGAACCCGG GGGTGGTGAA CGCGCTCGTG
TTCGCGGGCA TCGAGGCGTT CGCGCGCCGG GCCGGCGTCG CGCCCACGCC CGAGGCGCTG
CGGCTCCACG CGGTGCTGTT CACCGAGGAG GACACCACCG TCGAGACGCT GGGCGCGCCG
CCCGCGGGCG CGTTCCCCAT GACCTGGAGC CCGCTGCACT GCCTGGAGGA GCTGCTCCTC
GACGACGCGC TCGCGGTCCG GCGCGGGGAG CTCGTCCGCC TCGGCCACCG GCCCTGCGAC
GCCTGGTACC GCGCGCGCTG CGGGGATCGG ATCGTGGAGG GGTTCGTGGT CCCGCACGAG
GAGGTGCTCA CGCTGGCGGA GCGCCTGCCG GAGCAGGAGC TGGCGTTCGT GTACCGGCTG
CCGCCCGCCG CCCGCGCCGC GCTCGCGGCC GCGCCGCAGC GGGTCCGCCC GGCCGCCTGG
CCGCTCCACC GCATGTACCC TCCGCACCGC ACCGCGCTCC GCGGGCGGGA CCGCGTGGGC
GTGCTCCTCT GCAGCCTGCG CTTCGGGGAG CTCTGGATCG GCTACGACGT GGGCGCGGGC
GCCGCCGGGC GCCTCGGCAC CGGCGCCACC CAGCTCCAGG TCGCCGCCGG CGTGGCGGCG
GGCTGGGCGC AGCTCGGCCG CCGCCGCGGG CTCCACTTCG TCGAGGACCT CGACTGGCGC
GAGCACCTGG CGCGGGTGGA CGCGCTGCTG GGGCGGGCGC TCGTGGTCCA CGACCCGCAC
GCGCCGCCGC GCACGCTGGA GGAGCGGCGC GTGGGCGCGG CGCCGGCGGA GGCGACCGCG
CTCCCCGCCT GA
 
Protein sequence
MNRSVGPRGT ALLVGAAGGV ARALLSVLAS TPLGRALAAR LDALLLVDAR PLPPGPLPPI 
ARPLPQAGIR HADDLARLVR DHGVDQVVDL SSLDTLDAIR ACDAAGASYL DTSLEHWPGE
APRAWESLVL RAMPPARPAL RRGSFLVGSG MNPGVVNALV FAGIEAFARR AGVAPTPEAL
RLHAVLFTEE DTTVETLGAP PAGAFPMTWS PLHCLEELLL DDALAVRRGE LVRLGHRPCD
AWYRARCGDR IVEGFVVPHE EVLTLAERLP EQELAFVYRL PPAARAALAA APQRVRPAAW
PLHRMYPPHR TALRGRDRVG VLLCSLRFGE LWIGYDVGAG AAGRLGTGAT QLQVAAGVAA
GWAQLGRRRG LHFVEDLDWR EHLARVDALL GRALVVHDPH APPRTLEERR VGAAPAEATA
LPA