Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_3970 |
Symbol | |
ID | 3887782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 4584896 |
End bp | 4586263 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 81% |
IMG OID | 637865528 |
Product | NusB/RsmB/TIM44 family protein |
Protein accession | YP_467171 |
Protein GI | 86160386 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.110123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGTCC GCACGTCCAT CCCGGCCGCG GGCGCCCGCG GCATCGCGTT CGAGGTGCTC CGGCGCGTGG ACGAGGGCGG CGCGTACGCG TCGCGCGCGC TCGACGCGGC GCTGGGCGCG GCCGGCGCGC TCGATCCCCG CGAGGCGGGG CTCGCCACCC AGCTGGTCTA CGGCACGCTC CGGCGGGCGC TCGCGCTCGA CGCCGCGCTG GCGCCGCACT CCCGCCGCCC GCTCGCCGAG CTGGATCCGG CCGCGCGGGT CGCGCTGCGG CTCGGCGCCT ACCAGCTGCT CGTGCTCGGC ACGCCCGCGC ACGCGGCGGT GGGCGAGACG GTGACGCTCG CGAAGGCGGC GGACCACGGC CGCGCCGCCG GGTACGTGAA CGCGGTGCTC CGGGCGCTCT CGCGCGCCCC GCGCTTCCCG GACCCGCCCG CGCTCGAGGC GGATCCGGCC GGCCACGTCG CCGCCGCCGA GGCGCTGCCG CGCTGGGTGG CCGAGGAGTG GGTGGCCTGG CTCGGCGCCG GCGAGGCCCT GGCGCTCGCG CGGGCGATGA ACGCGCCGGC CCCGCTGTGC GTGCGGACGC CCGATCGCGA GGCGCTGCTG GGGCGGGCCC GCGCCGCCGG GCTCACCGCG GCGCCCGCGG CCCGCGCGCC GGGCGGGGTG GTGCTCACCG GGGCGTCGGT GGCCGAGCTG GCCCACGCGG CCGGGGACGT GCCGTTCCAG GTGCAGGACG AGGCCGCGCA GCTCGTGACG CTCCTCGCGG CGGGCGACCT CGCCGGCCGG CCGGCGCGCG TGCTCGACGC CTGCGCCGCG CCCGGCGGCA AGGCGTTCCA CCTGGCCGAG CTGCTCGGGC CCGGGGCCGA GGTGGTCGCC GTCGAGCTCC ACCCGCGCAA GGCCGACGAG CTGGCCCGCG AGGCCGCGCG CCGCGGCCTG CCCGCGGTGC GGGTGGTGTG CGCCGACGCG GGGAAGCCCA TCCCCGGGCT CGAGCCCGGG AGCTTCGACG CGGTGCTGGT GGACGCGCCC TGCGCCGGCC TCGGCACGCT CCGGCGCCAC CCCGAGCTGA AGCTGCGCCG CGCGCCCGGC GACCTGCCGC GCATGGCCGC GCTCCAGCGC CAGATCGCCC TCAACGCCGC CCGGTACGCC CGGCCCGGCG CGCCGGTCGT CTACTCGATC TGCTCGCTCT CGCGCGCCGA GGGGCCGGAG GTGGTCGAGG CGCTCCTCGC CCAGGGCTTC CGCCGCGCCC CGCCGCCCGC CGGCTTCCCG GCCGACGTGC TCGACGCGCA GGGCGATCTG CTCGCCCTCC CCAGCCGCCA CGGGACCGAC GGCTTCTACG CCGCGCGGCT GGTGCGGGAC GCGCCCTCCA CCGACTAG
|
Protein sequence | MAVRTSIPAA GARGIAFEVL RRVDEGGAYA SRALDAALGA AGALDPREAG LATQLVYGTL RRALALDAAL APHSRRPLAE LDPAARVALR LGAYQLLVLG TPAHAAVGET VTLAKAADHG RAAGYVNAVL RALSRAPRFP DPPALEADPA GHVAAAEALP RWVAEEWVAW LGAGEALALA RAMNAPAPLC VRTPDREALL GRARAAGLTA APAARAPGGV VLTGASVAEL AHAAGDVPFQ VQDEAAQLVT LLAAGDLAGR PARVLDACAA PGGKAFHLAE LLGPGAEVVA VELHPRKADE LAREAARRGL PAVRVVCADA GKPIPGLEPG SFDAVLVDAP CAGLGTLRRH PELKLRRAPG DLPRMAALQR QIALNAARYA RPGAPVVYSI CSLSRAEGPE VVEALLAQGF RRAPPPAGFP ADVLDAQGDL LALPSRHGTD GFYAARLVRD APSTD
|
| |