Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_3361 |
Symbol | rph |
ID | 3889351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | - |
Start bp | 3869334 |
End bp | 3870053 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637864916 |
Product | ribonuclease PH |
Protein accession | YP_466565 |
Protein GI | 86159780 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0689] RNase PH |
TIGRFAM ID | [TIGR01966] ribonuclease PH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.32981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAAAGA ACGGCCGCGG CCCGCTCGAC CTCCGTCCCA TCCTCCTCGA GCCCCGCGTC TCCAAGCACG CGGAGGGCTC CTGCCTGGTG CGCTTCGGCG ACACCCACGT GCTGTGCACC GCCTCGGTGG ACGAGAAGGT CCCGCCGCAC GTGTACGGCA CCGGCGCCGG CTGGGTGACC GCGGAGTACG GCATGCTGCC GCGCTCCACG CACGAGCGGA TGCAGCGCGA GGCGGCCCGC GGGAAGCAGA CCGGGCGCAC GCTCGAGATC CAGCGGCTGG TCGGGCGGGC GTTGCGCGCG GCGGTGGACC TGCGCGCCAT CGGGCCGCGC ACCGTCACGC TGGACTGCGA CGTGATCCAG GCCGACGGCG GCACCCGGAC CGCCGCCATC ACCGGGGCCT ACGTGGCGCT GGTGCAGGCG GTGCGCAGCA TCCAGAAGCG CAAGCAGCTC GCGCACGATC CGGTGAAGCG CAGCGTGGCG GCGGTGTCGG TGGGGATCGT CGCGGGGGAG GTGCACCTCG ACCTCGACTA CGACGAGGAC TCCACCGCCG AGGTGGACAT GAACGTGGTC GCGACCGGCG AAGGCGCGCT GGTGGAGGTC CAGGGCACGG CGGAGGGCAA GCCGTTCGCG CGCGCCGAGC TGGACCGGAT GCTCGACGCC GCGCTGGCCG GGCTGTCGCG CCTGAAGGAG CTCCAGGAGG CGGCGCTCCG GACGCCGTGA
|
Protein sequence | MRKNGRGPLD LRPILLEPRV SKHAEGSCLV RFGDTHVLCT ASVDEKVPPH VYGTGAGWVT AEYGMLPRST HERMQREAAR GKQTGRTLEI QRLVGRALRA AVDLRAIGPR TVTLDCDVIQ ADGGTRTAAI TGAYVALVQA VRSIQKRKQL AHDPVKRSVA AVSVGIVAGE VHLDLDYDED STAEVDMNVV ATGEGALVEV QGTAEGKPFA RAELDRMLDA ALAGLSRLKE LQEAALRTP
|
| |