| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeh_1033 |
|---|
| Symbol | |
|---|
| ID | 3888496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007760 |
|---|
| Strand | + |
|---|
| Start bp | 1190196 |
|---|
| End bp | 1190792 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 637862555 |
|---|
| Product | rhomboid-like protein |
|---|
| Protein accession | YP_464245 |
|---|
| Protein GI | 86157460 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCCCT TCCCCTGGGT CACCGCCGCG GTGCTCTCCC TCGCGCTCGG CGCGTACCTC
GAGCCGGCGC TGGGCGAGCT GCTGATCCTC GACCGCGCGC GCGTCGCGAG CGGCGAGGCG
TGGCGCGTGC TCACCGGGAG CCTCGTGCAC TTCTCGGCGT CGCACCTCGC GGTCGACGCC
CTCGCGTTCG GCGTCGCCGG CGCGATGCTG GAGCGCCGCG GCCGCGCGAG GTTCGCGACG
CTGACGCTCG CGTCGGCCCT CGCCGTCGGC CTCGCGGTGC TCTGGCTCCA GCCCTCGCTC
CAGCGATACG CCGGGCTCTC CGGGATGGCG TACGCGGCGA TCGTCGCGCT CGCGCTCGTG
GGGCTGCGCG AGCCCGGCCC CATGCCGACG CTCTCCGGCC TCGCGCTCGC GGCGTGCGTC
GCGAAGCTGG CATGGGAGCT CTCCACCGGG CGGATGCTCC TCGCCGGCGC GCCGCCGGGC
GTCGTCGCGG TCCCGCTCGC CCACCTCGCG GGCGCGATCG CAGCCGTCGC CGTCACCGGG
GCCGGGGGAC GGCTCGGCGC GGCGCGCCCC GTCGCAGGGC GTCCAGCAGC GCGGTGA
|
|---|
| Protein sequence | MRPFPWVTAA VLSLALGAYL EPALGELLIL DRARVASGEA WRVLTGSLVH FSASHLAVDA
LAFGVAGAML ERRGRARFAT LTLASALAVG LAVLWLQPSL QRYAGLSGMA YAAIVALALV
GLREPGPMPT LSGLALAACV AKLAWELSTG RMLLAGAPPG VVAVPLAHLA GAIAAVAVTG
AGGRLGAARP VAGRPAAR
|
|---|
| |