Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_0884 |
Symbol | |
ID | 3886622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 1021930 |
End bp | 1024110 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 80% |
IMG OID | 637862405 |
Product | ATP dependent DNA ligase |
Protein accession | YP_464096 |
Protein GI | 86157311 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02776] DNA ligase D [TIGR02777] DNA ligase D, 3'-phosphoesterase domain [TIGR02778] DNA polymerase LigD, polymerase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.911309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGACC CGGGCCGGAC CCCGGAGCCG TTCGGCGGCC GCGGGCCCGG CGACGGCGAG CCCGGCCCGG CGCGGGCGTT CGTGGTGCAG AAGCACGCGG CCCGGCGGCT CCACTGGGAC TTCCGGCTGG AGCTGGGCGG CACGCTGCGG AGCTGGGCCG TGCCGAAGGG CCCGTCCGCG GATCCGTCCG ACCGCCGCAT GGCGATCGAG GTCGAGGACC ACCCCGTCGA GTACGCCGAC TTCGAGGGGA TCATCCCGGC GGGAAACTAC GGCGCCGGGG CCGTGATCGT GTGGGATCGC GGCGCGTGGT GGCCGGTGGG CGATCCCGAG GACGGGCTGG CCCGCGGCAA GCTGGTGTTC CGGCTGCGCG GCCACAAGCT GCACGGAGAG TGGACGCTGG TCCGGACCCG CGCCGCGGAG GGCGGGAAGC GCGAGTGGCT GCTGCTGAAG CACCGCGGCG ACCCGTTCGC CGGGCCGGGG CGGCCGTTCC CGGAGGCGTC GGTGCTCTCC GGCCGAACGG TGGAGGAGCT CGCGGCCGGG ACGAGCCGGG CCGAGGCGGC CGCGCGCGAG GCCGCGCGCC TCGGCGCGCC GGAGCGCCCG CTCCCGGCGC GAGGGGTGGC GCCCATGATG CCCGGCGCGC GGCGCCCGCC GTTCGACCGC GCGGGCTGGA TCTTCGAGGT GGCGCAGGGA GGCCAGCGCG TGTCGGCGCG CCGCGAGGGC ATGGGGGCGG TGCTGCGCAC GCCGGGGGGC GAGGAGCTCG CCGCGCGCTT CCCCGAGGTG GCGCTCGCCG TGGCGCTCCT GCCGGCGGAT CCGGTGCTCG ACGGGGAGCT GGTCGTGCTC GACGACGACG GACGCGCGTC GCCGGAGGCG CTGGAGGCGC GCGCCCGGGC CGCCACGGGC GCGGCCGCAG GCGCCGCGCT GGAGCGGCCG GCGACCCTGT TCGCGTTCGA CCTGCTGGCG CTGGGCGGGC GCGACCTGCG CCGCCTGGCG CTCGCGGATC GCAAGCGGCT GCTCGCCGAG GTCGCGCCGG CGGTCGGGGC GGTGCGCTTC GCCGGCCACG TCGAGCGGGC GGGGCGCGCG CTCCACCGCG AGGCGGAGCG CCGGGGCCTC CCCGGCGTGC TCGCCCGCCG CGCCGCGGCG CCCTACCGGG CAGGCCGATC CGCCGACTGG GTCCTCGTGC CGGCCGCTGC AGGCCCTGCG CCGCGCCGCC CGCCGCCGGG CGTCCGGTCG AGGCCGCCGG CCGCGCCACG CTCCCGCGGG CCGGAACGCA GCGTGAACGT GACCCACCCG GAGAAGGTCT GCTTCCCGGA GGACGGGATC ACCAGGGGCG ATCTGCTCGC CTACCACCGG GCCATCGCGC CGTTCATGCT GCCGTTCCTG GCCGACCGTC CGCTGGTGCT CACCCGCTTC CCGGACGGCA TCCACGGCCG GAGCTTCCTC CAGGAGGACG CGCCCGCGTG GCGGCCGTCC TGGCTGCGCG CGGTGCCGGT GCACGCGGAG GGCGGCCGCG CCGCCGAGCA CCTCGTGGTG GACGACGCCG ACGGCCTCGC CTGGCTGGTG AACCAGGGGG CGATCCCCTT CGACGTGCTG GCGGGCCGCG CGGGCGCGCT GGAGCGGCCG GACTGGTGCG TGGTGGAGCT CGACGCGGCC GGCGCGCCGT TCGCGCAGGT GGTGCGGGTG GCGCGCGCGC TCCACGCGCT CTGCGCCGCC GCCGGGCTGC CGAGCCACGC GAAGACCGCC GGGGAGCGGG GGCTCGACGT GCTCGTCCCG CTCGGCGGCC AGCTCACGCA CGCGCAGGCG CGGACGCTGG CCGAGCTGCT GGCGCGGACG GTCGAGGCGG AGCTGCCCGG GCTCGCCACC ACCGCCCGCA CGGCCGCGGC GCGCGGCGGA CGCGTGCACC TCGACTGCCT GCGGAACGGC CACGGCGCGG CCATCCCGGC GCCCTACACG GTCCTGCCGC GGCCGGGCGC GCCGGTGTCC ACGCCGCTGC GCTGGAGCGA GGTGAACGCC CGCCTCGACC CGGCGCGGTT CACCGTCCGG ACCGTTCCCG CGCGCGCGGC CCGGCTCGGC GCGGATCCGC TCCGGCCCGT CCTGACCGAG CGCCCCGACC TGCTGCGCGC GCTCGCGCGC CTGCGGGCGC GGCCGGGTGC GGCCGGCCGG CGCGCCGCTC GCCGGCCTTG A
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Protein sequence | MRDPGRTPEP FGGRGPGDGE PGPARAFVVQ KHAARRLHWD FRLELGGTLR SWAVPKGPSA DPSDRRMAIE VEDHPVEYAD FEGIIPAGNY GAGAVIVWDR GAWWPVGDPE DGLARGKLVF RLRGHKLHGE WTLVRTRAAE GGKREWLLLK HRGDPFAGPG RPFPEASVLS GRTVEELAAG TSRAEAAARE AARLGAPERP LPARGVAPMM PGARRPPFDR AGWIFEVAQG GQRVSARREG MGAVLRTPGG EELAARFPEV ALAVALLPAD PVLDGELVVL DDDGRASPEA LEARARAATG AAAGAALERP ATLFAFDLLA LGGRDLRRLA LADRKRLLAE VAPAVGAVRF AGHVERAGRA LHREAERRGL PGVLARRAAA PYRAGRSADW VLVPAAAGPA PRRPPPGVRS RPPAAPRSRG PERSVNVTHP EKVCFPEDGI TRGDLLAYHR AIAPFMLPFL ADRPLVLTRF PDGIHGRSFL QEDAPAWRPS WLRAVPVHAE GGRAAEHLVV DDADGLAWLV NQGAIPFDVL AGRAGALERP DWCVVELDAA GAPFAQVVRV ARALHALCAA AGLPSHAKTA GERGLDVLVP LGGQLTHAQA RTLAELLART VEAELPGLAT TARTAAARGG RVHLDCLRNG HGAAIPAPYT VLPRPGAPVS TPLRWSEVNA RLDPARFTVR TVPARAARLG ADPLRPVLTE RPDLLRALAR LRARPGAAGR RAARRP
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