Gene Adeg_2180 details

Gene Information

• Locus tag: Adeg_2180
• ID: 8492196
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ammonifex degensii KC4
• Kingdom: Bacteria
• Replicon accession: NC_013386
• Strand: -
• Start bp: 26960
• End bp: 27382
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 646360175
• Product: PilT protein domain protein
• Protein accession: YP_003240106
• Protein GI: 260894012
• COG category: [R] General function prediction only
• COG ID: [COG1569] Predicted nucleic acid-binding protein, contains PIN domain
• TIGRFAM ID: [TIGR00305] probable toxin-antitoxin system toxin component, PIN family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.18775
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGGGCGG TAATCGATAC CAGCGTGCTG GTCTCGGCCT TCTTGAGTAA AAGAAGCCAT 
CCGGCGAAGG TGCTCGATGC CTGGATCCTC GGCCGGTTCA CGCCCGTTGT GAGCCCGGAG 
TTGGTAAGGG AGTACGCCGC CGTTCTGGTT CGTGACAAGT TCGCCGTCCT GGGTTCGGTT 
GCAGACAGGA TTAACCTGCT GGAGGAGATT CTCGCCCTCC CCTGGGTGGT GATGGTGCAT 
CCGAAAGAGA AGATTTCTGT GGTGCAAAAA GATCCGGAGG ACGACAAGGT ACTGGAGTGC 
GCCGTAGAGG GCAGGGCCGG GTGGGTGGTA ACCGGCGACA AGCACTTGCT GGAGCTGCGC 
TCCGTTAGAG GTGTAGCCAT CGTTACGGCA GAGGAGTTTT TGCGAGCTCT CGGAAAAGGC 
TAG 

 

Protein sequence

MRAVIDTSVL VSAFLSKRSH PAKVLDAWIL GRFTPVVSPE LVREYAAVLV RDKFAVLGSV 
ADRINLLEEI LALPWVVMVH PKEKISVVQK DPEDDKVLEC AVEGRAGWVV TGDKHLLELR 
SVRGVAIVTA EEFLRALGKG