| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_2106 |
|---|
| Symbol | |
|---|
| ID | 8492115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 2094127 |
|---|
| End bp | 2095656 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646360095 |
|---|
| Product | Peptidoglycan-binding lysin domain protein |
|---|
| Protein accession | YP_003240033 |
|---|
| Protein GI | 260893936 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGTG TGGGTAAGTA CCTGCTGCTC AAGCTCAACC AGGTGCTGGC CGAAGTGTCT
TCCTCCTATC CGCTGGAGAA AGAGGTCCAG TTGCGGGCAG AGGATCCGGA GGTGGAAAGC
CTCCTCTCTT TACGCCCGGA GGTCAAGATA GGCTCCGTTC AGGTGCTTGC CGGCCGAGTC
CTCTGGGAGG GTCAGCTTAC GCTCAAGCTC GACTATGTGG CCTGCCGCCC GGGAAAGCCG
GTGTACACCG CCCGGATTTC CGTTCCCCTG GCGGAGGTGG TGGAGATAGC CGAGGCCCGG
CCCGGCATGA CGGCCAGCGT GACGGCGGAA GTTAAGGAAA TGTCTTTGCG GCCGGGGAAA
ACCTGCAGCA GGAAGCTTTA TCTGACGGCG CTGGTGACGG CCCAGGTGAA GCTCACGGCG
CTTAAAGAAC TCGAGGTGTT GGTTGAGCCC CCGCCGGGCC TAAAAGTTAC TACCAAGAAG
CTTAGGGTGG AAAACGTCGT ATCCTCTACC CGGGCGCAGT GCTTTCTGGC CAAGGAAGAG
CGGCTGCCGA CAGATAAGCC CACTTTGCGC GAGGTCGTGA GCACTTTGGC CTCCTGCCGG
AACACCCGCA CCGAGGTGAA GCGCGGTGGG GTCAGGGTCT GTGGGGAAGT GGAGTTCCGG
GTGCTTTATG CGGCGGCGGC CGACGCCTGC CCGGTTTACG AAGTGCACTT TATCTTGCCC
TGGGAGCATT TCGTAGCCAT TGAAGGAGTG GTTCCGGGCT TAGAGGCTCG AGTTTTAGCC
GAGGTCACAG TGAAGGCCAA GGCTAAGCCC AAGGGCAAAA CCCCAACGCG CGAGCTCGAG
CTGGAAGCCT TGGTCGATTT CCAGATGCTG GTGGGCAAGG TGATTGAGGC CGAGGTGGTA
ACTGGGATCG AAGGAGAGGC GGAGGTCACC AAGTCGCGCG TATGGCTGGA GCAGGTGGTA
GGCGAAAAAG AAAAAGAGGA GCTCGTCCGG CGGGAAGTCA CCCCCACCGT AGACCCGCCG
GTGGAGGAGA TTTTGTCGGC GGAACCTATG TTGGCGGTGG TGAGGGAGAC GGATGTTCTG
GATGGGATGG TGCTAGTCAA AGGGGAAGGG CTGGTGCGGG TGATCTACAC CGCTAAAGGG
ACGGGCAAGG TCCACGCTTT AGATGCCAAT CTTCCCTTCT CCTTGGCCCT CTCCCTCCCC
TCTGCCAAGC CAGAACATCA GGTAAGTGCC CAGGCAGAGC CGGTTTACGC CCGTGCCAGG
CTGGCCGAGA AAGGAAAGGT GGCGGTGGAA GCCCTGATAG CGGTGAAGGT CAGGGTGACG
GAGAGAGTAC AGGAAGAAGT GGTTACCTGC GTCAGGTTGC CGGCGGCGAA GGAGCGTCTC
TTGAAATACA CCATCAACCC GGGAGACACC CTTTACCGCC TGGCCCAGCG CTTCAACACC
ACGGTGGAGG CTATAATGGC GGCCAACCCG GGCATTGACC CCTATAACCT GCAGGTGGGG
CAGGTAATCT TCATCCCCTG CCGCTCCTAA
|
|---|
| Protein sequence | MSCVGKYLLL KLNQVLAEVS SSYPLEKEVQ LRAEDPEVES LLSLRPEVKI GSVQVLAGRV
LWEGQLTLKL DYVACRPGKP VYTARISVPL AEVVEIAEAR PGMTASVTAE VKEMSLRPGK
TCSRKLYLTA LVTAQVKLTA LKELEVLVEP PPGLKVTTKK LRVENVVSST RAQCFLAKEE
RLPTDKPTLR EVVSTLASCR NTRTEVKRGG VRVCGEVEFR VLYAAAADAC PVYEVHFILP
WEHFVAIEGV VPGLEARVLA EVTVKAKAKP KGKTPTRELE LEALVDFQML VGKVIEAEVV
TGIEGEAEVT KSRVWLEQVV GEKEKEELVR REVTPTVDPP VEEILSAEPM LAVVRETDVL
DGMVLVKGEG LVRVIYTAKG TGKVHALDAN LPFSLALSLP SAKPEHQVSA QAEPVYARAR
LAEKGKVAVE ALIAVKVRVT ERVQEEVVTC VRLPAAKERL LKYTINPGDT LYRLAQRFNT
TVEAIMAANP GIDPYNLQVG QVIFIPCRS
|
|---|
| |