Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_1867 |
Symbol | |
ID | 8491871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1866064 |
End bp | 1867044 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 646359856 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_003239799 |
Protein GI | 260893702 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.712125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAA CCGCTGACTT CTTTTCCTTA CTCTCTTCCG GCTTCCCTAT AGTACTGGCT CCCATGGCTG GCATAACTGA CCGCGCCTTC CGCCTAGTGG CTCGCGAAGG CGGGGCGCGC CTCTGCTGGA CGGAGATGCT ACCGGCTCCG GCCCTGGCCC GCTCTTCCGA GGCGAGAAAG CACCTGCTCG ACTTTCTGGG AGAAGAAGGG GTGGTAGCCC AGCTTTTCGG CAGCGATCCG GAGGAGATGG CGGAGGCAGC CCTGGTGGTG GAAGAAGCGG GGGCGGTGGC GGTCGACCTC AATATGGGCT GCCCGGTGGA AAAGGTGGTG AAGATAGGAG CAGGAGCAGC TCTTTTGCGC GACCCGCGCC AGGCGGCGGC TATAGTGGAG GCGGTTTGCC GGCGGGTAAA GGTGCCGGTC ACCGTCAAGC TGCGTAAAGG CTGGGACGAG AAGAGTCCCC CGGCCTGGGA GATGGCCCGC CTGCTGGAGG AAGCTGGGGC TAAGGCGCTC ATCGTGCACG GGCGCTACCG GCACGAGTTT TTCGGGGGAC GGGCCGACTG GGAGGCCATA CGGAGGGTCA AAGAAGCCGT GAAAATTCCC GTCATAGGCA ACGGCGACGT GCGGACTCCG GAAGATGCCC TGCGGATGCT TGCTTCGACC GGTTGTGACG GGGTTATGGT AGGAAGGGCG GCACGGGGCA ACCCCTGGAT TTTCACCCGC TGTCAGCTAT ACTCTCTCAG CGGCGAGATA CCTCCTCCTC CTTCGCCGGC GGAACGGGTG GCTCAGGGCT TAAAGCATCT GGCCTTACTG GAGGCGCTTT ACGGCGATAA GGCGCTCAAC CGGGGAAGGA TGGTGGTGGA CTGGTATACA CGCGGCTTGC CCGGAGCCTC TGCCCTCCGG GGTCAGGCCT ACCAGGCCCG CGATTTTGCT GCCCTCCGGT CTCTCCTGGA AAGATACCTC TATCAGGTAC AAACGTGCTA A
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Protein sequence | MSATADFFSL LSSGFPIVLA PMAGITDRAF RLVAREGGAR LCWTEMLPAP ALARSSEARK HLLDFLGEEG VVAQLFGSDP EEMAEAALVV EEAGAVAVDL NMGCPVEKVV KIGAGAALLR DPRQAAAIVE AVCRRVKVPV TVKLRKGWDE KSPPAWEMAR LLEEAGAKAL IVHGRYRHEF FGGRADWEAI RRVKEAVKIP VIGNGDVRTP EDALRMLAST GCDGVMVGRA ARGNPWIFTR CQLYSLSGEI PPPPSPAERV AQGLKHLALL EALYGDKALN RGRMVVDWYT RGLPGASALR GQAYQARDFA ALRSLLERYL YQVQTC
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