Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0994 |
Symbol | |
ID | 8490980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | - |
Start bp | 1009956 |
End bp | 1010600 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 646359017 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003238978 |
Protein GI | 260892881 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.146386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCCA AAACCGATTT TCTGGAACAA CCCGCTAAGA CCCGGATTCT GGAGGCGGCC GAAGAGGTCT TTGCCGCCAA GGGCTTTGCC GGAGCCCGGG TGGACGAGAT AGCTGCCCGC GCCCGCATAA ACAAGCGCAT GCTCTACCAC TACTTCGGAG ACAAGGAAAA GCTTTACCTC AGCGTCTTGG AAAACAACTT TGCCCGGGCC CTGAAGCTTA CCCACCAAGC CTTGGAGGAA AACTCCACCC CACCCGAGCA GGCAGAACAG GTCATTACCC GCTACTTCCT TTTCCTGGCC GAGCATCCCC GCTACGCCCG GCTGGTAACC TGGGAGATGC TGGAAGGAGG AAATTATGCC CGTCAGATAC TGCCGCCCAT ATGGGAAAGG GGCTTAAGTT CCCTGCGCTC CATCCTGGAA AGAGGGATGA AAGAAGGCTA CTTCCGCCAG GACATAGACG TGGACCAGCT CCTCATCACC CTTCACACCC TTTGTATCGC CTACTTCACC CACAAAAGCA TGCTGGCCAT CCTGTGGCAC GGCGACCCGC ATAGCCCCGA AAACCTAAAA AGGCGCCTTG ACCACATTCT CCGCCTGTTT CGCCAGTACG TCACTCCGCA TCCGGAAGGG GGAGCAAATG CATGA
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Protein sequence | MSAKTDFLEQ PAKTRILEAA EEVFAAKGFA GARVDEIAAR ARINKRMLYH YFGDKEKLYL SVLENNFARA LKLTHQALEE NSTPPEQAEQ VITRYFLFLA EHPRYARLVT WEMLEGGNYA RQILPPIWER GLSSLRSILE RGMKEGYFRQ DIDVDQLLIT LHTLCIAYFT HKSMLAILWH GDPHSPENLK RRLDHILRLF RQYVTPHPEG GANA
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