Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeg_0002 |
Symbol | |
ID | 8489960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ammonifex degensii KC4 |
Kingdom | Bacteria |
Replicon accession | NC_013385 |
Strand | + |
Start bp | 1663 |
End bp | 2781 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 646358040 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_003238029 |
Protein GI | 260891932 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCAGTTTA CCATAAGCCA AGAGGACCTG GAAAGAGTCT TGAGCGTCTG CCTGCGCTGC ATCCCCTCCA AACCTTCCAT GCCGCAGCTT GCCGGGATAC TCTTCCGGAA GGAAGGAAGC AAGCTTACCG CCACCGCTAC CGACCTTGAT GTTCAGGTAA CGGTAGAGCT GCCTCGGGTT AACCTAGAGG AGGAAGGGGA GCTCTGGCTG CCGGCTAAAG AGACCTTTGA CCTGGTGCGC CGCCTGCCGG AAGACGTCCT GGTAGAGCTC AGGCAGGCCG GATCGAACCA AGTTCTGCTT TCCTATCCCG GCGGGGAAGC CCGCCTTGCC GGCATGGACC CCGGGGAGTT TCCTTTGATA GAGCAAAGTG TGGAGGAAGT CTTGGAGTTT CCAGGAGAGG GGTTGCTAGA TGCCCTACGC TATGTCCTTT ACGCTGCAGC TCCGGATGAC CTGCGCCCCA TCTTCACCGG TGTAGAGATA AGCTACTCTT CTCCTGAAGG GGAGCTGACC TTTGCAGCCA CCGACGGGCA CCGGCTGGCG GTTTTCCGCC GCGGGGAGGA GCCAAGGCTG GAGTCGCGAG TGGTACCTGC CCAGTACCTG AAGGAGGTCC TGGTGCTAGG GAGGCTTTTG GGGGAAGAGC CCAAAAGGAT ACGACTAGGC AAGACTACAG CTTCCTTCCA CTGGGAGGAG GTAGAGCTTT ACTCCCGATT AATCGAAGGC AAGTTTCCCG ACTGGCAGCA GGCCTTGCCC AAGGATCCTC CCGCGACCTC CCTTTCCTTG ACCGTCGGTA CCTTACTTTC TTGCCTTGAG CGGGCGCGGG TCATAGCTCG GGCCCAAGCT TCCGGTGTCC CGGCGGTCTT TCTGGTCAAA GAGGGAGAAG GGGTCAGGAT AGAAGCCCGC AGCGAGGCGG GAGAGTTCAA GGAGCATGTA GATGGCCGGG CGGAAGGAGA AGACCTCACC TTGGCTTTCA ACGCCGACTA TCTTATGGAG GCCCTGCGGG TGCTGGACCG GGAGGCGGAG GTACTGGTCT CCCTTTATGG TCCCATGGCC CCGATAATCA TAACCTCGGG CAGTTGTAAG GAGTACCTAG CTTTGGTACT GCCACTACGC TTGGTGTAA
|
Protein sequence | MQFTISQEDL ERVLSVCLRC IPSKPSMPQL AGILFRKEGS KLTATATDLD VQVTVELPRV NLEEEGELWL PAKETFDLVR RLPEDVLVEL RQAGSNQVLL SYPGGEARLA GMDPGEFPLI EQSVEEVLEF PGEGLLDALR YVLYAAAPDD LRPIFTGVEI SYSSPEGELT FAATDGHRLA VFRRGEEPRL ESRVVPAQYL KEVLVLGRLL GEEPKRIRLG KTTASFHWEE VELYSRLIEG KFPDWQQALP KDPPATSLSL TVGTLLSCLE RARVIARAQA SGVPAVFLVK EGEGVRIEAR SEAGEFKEHV DGRAEGEDLT LAFNADYLME ALRVLDREAE VLVSLYGPMA PIIITSGSCK EYLALVLPLR LV
|
| |