Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_3575 |
Symbol | |
ID | 5159383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009470 |
Strand | + |
Start bp | 24356 |
End bp | 25762 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640538881 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001220314 |
Protein GI | 148244077 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.40765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCTGA CATTCCGGGT CCGCGCCTGC CCCACGCGGC AGCAACATGC ATGGTTCACC GCCTGCCTCG ATCACACGCG AGACCTCTAC AACGCAGCAC TTGAGGAAAG GCTGGGCGCC TGGCGGAAAG CACGGAAGCG CATCACCCTC GGCGAACAGG GAAAGGCGCT CACTGAACTG CGCAGGGATG CCGAATATGC CGCTTTCCCG CGGCGCATGC AGCGCTGGAC GCTCGATCGG GTCGATGTTG CCTACCGCGA GCATGTGAAG CGACTAGCTG ACCCGGCCAG GCCACGCGGC GATATCAGGT TCCGGGGCAA ACCATTCTGG CGGACAATCG GCTTCGATTC ACCGATCGAT TTCGAGATGC GGGACCGCGG CCTGTATCAG CGCAAGGCGC TGGGCGGGAC GCTCCGGCTT AAGCGCGACC GCGATCTTCC GCCATGGGAA AACTGCAAGG CAATTACGCT CACCCGGGAA GACCGGCGCT GGTTCGTCAA CCTGACCTAC GAAATGCCAG CCCCGGCACA CTCCCCACGG CTGGTGCCGA TGAGGCCGGT GGGCCTCGAT CTCGGCCTGA AAACCTCCGT TGTCCGATCG GACGGTGCCG AAATCGATGC GGTCGGCTCC TTGCGGGCAG CATTGCCCGA ACTGCGCCGC CTTGGTCGTG CCCTCGCCCG CTGCAAGAAG CGGTCGCGGC GCCGGCACAA GGTGAAAGCG CGCCTGGCGC GGCTGCATGC CAAAATCAGC CGCCGGCGGG GCGCCCGCCT GCATGAAATT TCCGCCCGCC TGGTGCACCA TTGGGACGCC GTGGCCGTCG AGGATCTGAA CCTCGCTGGT CTGATGCGTG CCGGCGACCG GCGCGCTCAG GGGCGCGGCA TGCGCCGCAA ATGGCGCGAT TTCTCACCGG GCAGGCTCGT CTCGCTGATC GAATGGAAAT GCCAGCGCGA GGGCCGGGCC TTCGCCCGTG TCGATCCGAG AGGAACTTCG CAAGAATGCG CTGGCTGCGG CTCTTTCGTG CCGAAGACGC TGCGAGACCG GATGCATCGA TGCGAAAACT GCGGAATCGT TCTCGATCGC GACCATAACG CGGCCTTGAA CGTGTTGAAC CGGGCCGGGT GGGGTCCGGG GGGCGCTAAT CCTGATGGCA AGGTCGGTAA TCCTGCCGAT CTGGTGCGGG ATTGCCCCGG AAATACGGCA GGGGATGACC CGGCCGGACC ACGGCGAGGT GGCCTTGCCA CCTCCCTTCA TCCTACTACG TGCAATCGGT GGAATGGCGC CTATGGAAAC TCTTGTTCCA TATCATATGG TTACAGGAAG ACCGTTCCCC GCGCACGCGG GGATGAACCG CGCCTCGGCC AGTATGTGAT CGCGGCGATC GTCCGTTCCC CGCGCACGCG GGGATGA
|
Protein sequence | MMLTFRVRAC PTRQQHAWFT ACLDHTRDLY NAALEERLGA WRKARKRITL GEQGKALTEL RRDAEYAAFP RRMQRWTLDR VDVAYREHVK RLADPARPRG DIRFRGKPFW RTIGFDSPID FEMRDRGLYQ RKALGGTLRL KRDRDLPPWE NCKAITLTRE DRRWFVNLTY EMPAPAHSPR LVPMRPVGLD LGLKTSVVRS DGAEIDAVGS LRAALPELRR LGRALARCKK RSRRRHKVKA RLARLHAKIS RRRGARLHEI SARLVHHWDA VAVEDLNLAG LMRAGDRRAQ GRGMRRKWRD FSPGRLVSLI EWKCQREGRA FARVDPRGTS QECAGCGSFV PKTLRDRMHR CENCGIVLDR DHNAALNVLN RAGWGPGGAN PDGKVGNPAD LVRDCPGNTA GDDPAGPRRG GLATSLHPTT CNRWNGAYGN SCSISYGYRK TVPRARGDEP RLGQYVIAAI VRSPRTRG
|
| |