| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_3560 |
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| Symbol | |
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| ID | 5159360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009470 |
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| Strand | + |
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| Start bp | 7483 |
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| End bp | 9297 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640538867 |
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| Product | Type IV secretory pathway VirD4 components-like protein |
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| Protein accession | YP_001220300 |
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| Protein GI | 148244063 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.486257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGCA TCAAACCAAG CACAAGCAAC GCTGTATATC GCGTGGCAAT GGGCTTCACG
ATGATCTACG CGGCGCTTCT CACCTTCGGT TTCTGGTTCG CCTGGCTAAG GGCGGAGTCC
GCCTATCTGT TCATCCTGCA AAGTTCGGCA GCATCGATCA TCGTTAATGT GGGTCTGCCG
GCAATCGCCA ATATGGCCCG GAATCAGGTG GAACGGCGAC AGATTTTTCA CCGAGCGCTC
TCCCTCGTCG TGGTGCTTGG CATCGTCAAT TTTGCGGGCC TCTACTACGG CTCGAAATAT
CTATACGAAA CAGGTTTCCC CGGCTGGGCC GCGTGGTTCA CCACGATATT GGTAGCCGGG
ATGGTAACGC TCCTGGCAAC CTTCATCACG CTGGGAGCCC CATCGATTGA AAAACAGATC
ATGGAAATTC CGCCACATAT CGGCGCGCTC AGGCCAGGTG AAAAATGGCT GAGGGGAGCG
AAGATCGAAG CCGCGCCGCA AGGACAGATC ATTGATCGCG GGCGTCTGTC GGTCGGAGGA
ATTCCTCTGG AATGGGATCG GGAAGTCCAG CACACCTTTC TCAATGGCGC GGCCGGTACG
GGAAAAACCC AAGTCGCCGA AGGTTTTTTG CGGGCAATTC GCGAACGCGC ACTGCTCCCC
TATATAAAAA AATCGCCCCG CGTGATTATC CTCGATCCGG GCGGCGCATA TTATAGCCGC
TTCGGACAGG ACGGGGATGT CTTGTTGAAC CCGTTCGATG CCCGCTCGGT GGCATGGTCA
CCATTCGCGG AGATAAAAAG GCCGCAGGAC TTTAATCGGG TAGCTGCGGC TTTCGTGCCC
CTTGCGGAGG GACCAAATAA GGAATGGTCT GAGTTCGGCA GAAAGACTAT GGCCGACACG
ATGCGGGCGA TGGTCAGGAA TGACGAAAAA AGCCCGCAAG AGCTATTCCG CCTTCTGGAT
GGATCGGCTG AAAATCTCGC ATTCTATCTG AACAACGCAG AGATTTATGG CCTTACAGGC
GAGGAAAACA TGAAGATGTT TTCCAACGCC AAGGCGACCA TCGCGCCGAA TATCGAGATA
TTTCAATATC TGAAACCGGA CGGCAATTTC TCGGTGCGGG ATTGGTTACG CAAGGGCGAT
GAGGCGAACG ACTCCGGCTG GCTGTTCATC ACCTACCGCG ACGATCAGAT GAAGCTGCTC
CGCCAGTTCG TCGCGGCCAT GGCCGATCTG GCTATCCTGG AAGGGCTGAG CTTGCCCTCC
AACGAAGGGC TGCCGGCCGA GGAACACCGC CGCCTGTTCT ATTTCATGGA CGAGCTGGAC
TCCATCGGCG CGGTGTCCGA GCTGAAAGAC GCGCTCATAA AGCTACGAAA ATTCGGCGGC
TGTTGTGTTC TCGGCTTGCA GACGATCTCA CAGCTTCGCG CCGTCTACGG CAGAGACACG
ACCCGCGCCA TCCTCGGCAA CGTCGCGACC AATGTTGTCT TGCGCCCGCA GGATGGCGAG
ACTGCCGAAG AAATGGAAAA GCTGCTCGGA GATCAGGATA TCGAGCGCGA GACGGTCACC
TACTCCCAAA GCGCCGGCAA TTCGCGCTCC GGCATGTTCG GTAATGGGCA CTCCAACACA
TCAACCGGGC GAACCGCCAA CCAACAAAGG CAGATCGTCA CCCGCAAATG CGTGCTGGCC
TCCGAGTTGC AGAACATGGA AAACCTGCAC GGCATCCTTA TGCGCCCCGC GTCGCCGCAT
CACCCCTTCA CCCTGGATTA CGTGGAGATG CCCCGGATCA ACGCGCCGTT CGTAGAGCAT
GAATATGCTG GCTAA
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| Protein sequence | MLSIKPSTSN AVYRVAMGFT MIYAALLTFG FWFAWLRAES AYLFILQSSA ASIIVNVGLP
AIANMARNQV ERRQIFHRAL SLVVVLGIVN FAGLYYGSKY LYETGFPGWA AWFTTILVAG
MVTLLATFIT LGAPSIEKQI MEIPPHIGAL RPGEKWLRGA KIEAAPQGQI IDRGRLSVGG
IPLEWDREVQ HTFLNGAAGT GKTQVAEGFL RAIRERALLP YIKKSPRVII LDPGGAYYSR
FGQDGDVLLN PFDARSVAWS PFAEIKRPQD FNRVAAAFVP LAEGPNKEWS EFGRKTMADT
MRAMVRNDEK SPQELFRLLD GSAENLAFYL NNAEIYGLTG EENMKMFSNA KATIAPNIEI
FQYLKPDGNF SVRDWLRKGD EANDSGWLFI TYRDDQMKLL RQFVAAMADL AILEGLSLPS
NEGLPAEEHR RLFYFMDELD SIGAVSELKD ALIKLRKFGG CCVLGLQTIS QLRAVYGRDT
TRAILGNVAT NVVLRPQDGE TAEEMEKLLG DQDIERETVT YSQSAGNSRS GMFGNGHSNT
STGRTANQQR QIVTRKCVLA SELQNMENLH GILMRPASPH HPFTLDYVEM PRINAPFVEH
EYAG
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