| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2937 |
|---|
| Symbol | |
|---|
| ID | 5160181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 3207531 |
|---|
| End bp | 3209642 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640554867 |
|---|
| Product | glycogen debranching enzyme GlgX |
|---|
| Protein accession | YP_001236046 |
|---|
| Protein GI | 148261919 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
|---|
| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCC TGCCGAAATG CATGACCGCG GGGCGGTGCG ATCCGCTGGG CGCGACCTGG
GACGGGTTCG GGGTCAATTT CGCGGTGTTC TCGGCCAATG CCGACCGGAT CGAACTATGC
GTGTTCGACA GGAGCGGCCG CCGCGAGATC GCGCGCTACG ACCTGCCGGA CTGCACGGAC
GAGGTCTTTC ACGGCTATCT GCCCGATGCC CTGCCCGGCC TCGTCTACGG ATACCGCGCC
CATGGTCCCT ATCAGCCCGA ACTGGGCCAC CGCTTCAACC CGAACAAGCT GCTGCTCGAT
CCTTACGCCC GCGCCCTGAT CGGCGAGGTC CGCTGGTCCG ACACGTTGTT CGGCTACCGG
CCTGGTGCCA CCCGCGCCGA CCTCTCGTTC GATCGCCGTG ACTCGGCCCA GGCGATGCCC
AAGGCCGTCG TCCTCACCGA CGACGCAACC TGGGGCGATG ACCGCAAGCC GCTTCTGGGC
TGGGCGGAGA CGGTCATCTA CGAGGCGCAC ATACGCGGCC TGACGCGGCA ACGCGCCGAC
CTTCCCGAGG ACAGGCGCGG CACCTTCGCC GCGCTGCGCG ATCCGCGCAT GATCGATCAT
CTCGTCAGGC TCGGGATCAC CGCGATCGAG CTTCTCCCGG TTCACGCGAT CCTGCAGGAC
CGGTTCCTCG TCGAGCGGCG ACTCTCGAAT TACTGGGGCT ACTCGACGCT TTCCTTCTTC
GCGCCGGAGC GGCGCTATTT CGCCGAGCCC GACAACCCGG ATGACGAGTT GCGCGCCACC
GTCCGGCGCC TGCACGAAGC CGGAATCGAG ATCATCCTCG ATGTCGTCTA CAATCATACC
TGCGAGGGGG ACGAGACCGG CCCCACGCTT TCCTGGCGCG GGCTCGACAA TGCCAGCTAT
TACCGGCTTA TGCCCGGCCA CCAACGCCGC TGCGTCAACC ACACGGGGTG CGGAAACACG
GTCAACATCG CCCACCCGCG CGTGCTGCAG ATGGTGACCG ACAGTCTGCG CCATTGGGCA
ACGCGCTTCC GGATCGACGG TTTCAGATTC GATCTCGCAA CGACGCTCGG CCGCGAAGCG
GATGATTTCG ATCCCTCCGC CGGCTTCTTC GATGCCATCC GGCAGGATCC CGTGCTCTCC
CGCCTCAAGC TGATCGCCGA GCCGTGGGAC CTCGGGCCCG GCGGCTATCA GCTGGGCAAT
TATCCGCCCG GCTTCGCCGA ATGGAACGCG GCATTCAGGG ACGGCGCGCG GCGGTTCTGG
CGTGGCGATC CCGGGCAGCG GCCGGAAATC GCGCGCCGGC TGATGGGCTC GCCCGAATTG
TTCGATCGCC GCCGCCGGCG TCCCTCGGCC TCGGTCAATT TCGTCACCGC GCATGACGGC
TTCACCCTGC GCGATCTCGT CTCGTATTCG GAACGGCATA ATTTCGCCAA CGGCGAGGAC
AACCGAGACG GCGCCGAAGA CAACGTCTCC TCGAACTGGG GCGTCGAGGG CGAGACCGCG
GACGGCGCGA TCAATGCCCT GCGCGATCGC GTGCGCCGGG CGCTGCTGGC GACGTTGTTT
TCATCATACG GCACGCCGAT GCTGCTCGCG GGAGACGAGA TCAACCGCAC CCAGCGCGGG
AACAACAACG CCTATTGCCA GGACAACGAG CTTTCCTGGC TCGACTGGAC CGCGCTCGAC
GACGAGTCCG GCACCGGCAT GCTCGGCTTC GTCACCGCGC TGGCCGCCGT GCGTCGCCGC
TATCCCAGTC TGCGCAGCGC CGTCTTTCTC CACGGTATCG GCATGATCGC GGATGACCTG
CCGGACACCG CCTGGTTCGA CGAGGCCGGA AACCCGCTCG ACAGTCACGC CTGGTCCGAT
GCCGCGGCGC GCCTGCTGGT GCTGCGGCGC GCCACCGCGA GCGAACGGCG GCGCGAGGCA
ACCCTGCTGC TGCTGAACGC CTCCGAGGAT GACAGGGTCT TCACCCTGCC CGCACCCGCC
TTCGCCTGGA TCGTCGAAAT CGATTCCGCC CGGGCGGAGC AGTCCCGCCG CCCGGTGGAC
GGCCCCGATC TCACCGTCGC CGCGCGGTCG ATGATGATCC TCGGCGCCGA GCTCGCGCCG
CCAACGGCAT GA
|
|---|
| Protein sequence | MASLPKCMTA GRCDPLGATW DGFGVNFAVF SANADRIELC VFDRSGRREI ARYDLPDCTD
EVFHGYLPDA LPGLVYGYRA HGPYQPELGH RFNPNKLLLD PYARALIGEV RWSDTLFGYR
PGATRADLSF DRRDSAQAMP KAVVLTDDAT WGDDRKPLLG WAETVIYEAH IRGLTRQRAD
LPEDRRGTFA ALRDPRMIDH LVRLGITAIE LLPVHAILQD RFLVERRLSN YWGYSTLSFF
APERRYFAEP DNPDDELRAT VRRLHEAGIE IILDVVYNHT CEGDETGPTL SWRGLDNASY
YRLMPGHQRR CVNHTGCGNT VNIAHPRVLQ MVTDSLRHWA TRFRIDGFRF DLATTLGREA
DDFDPSAGFF DAIRQDPVLS RLKLIAEPWD LGPGGYQLGN YPPGFAEWNA AFRDGARRFW
RGDPGQRPEI ARRLMGSPEL FDRRRRRPSA SVNFVTAHDG FTLRDLVSYS ERHNFANGED
NRDGAEDNVS SNWGVEGETA DGAINALRDR VRRALLATLF SSYGTPMLLA GDEINRTQRG
NNNAYCQDNE LSWLDWTALD DESGTGMLGF VTALAAVRRR YPSLRSAVFL HGIGMIADDL
PDTAWFDEAG NPLDSHAWSD AAARLLVLRR ATASERRREA TLLLLNASED DRVFTLPAPA
FAWIVEIDSA RAEQSRRPVD GPDLTVAARS MMILGAELAP PTA
|
|---|
| |