| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_2425 |
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| Symbol | |
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| ID | 5160835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidiphilium cryptum JF-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009484 |
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| Strand | - |
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| Start bp | 2677156 |
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| End bp | 2679006 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640554351 |
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| Product | Type IV secretory pathway VirD4 components-like protein |
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| Protein accession | YP_001235538 |
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| Protein GI | 148261411 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.146549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAACT ACACCAAACT GGCGCATGCC GGGGCCCGCC TCACTCGCAA GCGCGAGATC
GACCGCAACA AATTTTACGC CAGCGTCGGC GGTCTGCTCG CGAGCGCGCT GATCGGCGCC
GCCGCTGCTG GATACTTGAT GACCTCGCCG ACACAAGCGG TTCAGGTTGT TGACTATATG
GCGGCCGACG TCGCTGCCAA TCTTATGAAG TTCGTTCCCA TCAATCCGGA AATGACAATC
GAATGGCGTG GTCGATCCTA CCGTACCGGA GTGAAAGAGT GGGCTGCGTT TCCGCCCCTG
CGAGATCAGA CGTTTGACGC TCTTGAGAAT CTAGCGGCAG GCGGAGCAAT TGGATTAGCA
GCGGGTTGGG TCGGCTTGTG GCTGAGTGCC GGGAGGCGCC GCCGCCAGAT GGAGGCCATA
CTGGCTGATA GGGTCGTGCG CGGCACAAAG CTCGTTACTG AAGCCGAACT AGCGAGACTA
AATGCTAATC ACGCAACAAA GCCTCTCCTA AAATTCGGCA GCGTCACTCT GCCAAGTCAA
TTGGAAAATC GGCACATTGC CATCATCGGC ACGACCGGGG TTGGCAAGAC GACGGTGCTC
CGGCAGCAAC TGGATGTGAT CGAGGCCAGG GGCGAGGCAG CGTTGGTGTA CGACACCAGC
GGCGAGTTCT TGGCGAATTA TTACAATCCG GCACGCGGTG ACATCATTTT GAACCCGTTC
GATCAGCGAG GGGTGTTTTG GAGTCCCTTC GCCGAGATCA TCCACCCGGC CGACTGCGAC
CGGATTTCCC GTTACCTTAT CACTGAGACC GGCGATGAGG ATAAGGACAT CTGGCTGGAA
ACATCCCGAA ACCTGGTTGC CAATATGATT CGCAACCTGT GGCGGGAAGG GAGGGGCACG
CTGGAAGCCT TGCTGAACGC GCTCCAGGCG ATGCCGCGCC AGGAACTGGA GCGCTGGCTC
GCCAACACAT CATCGGCCCG TACTTTCGAA AAGGATGCCG AGCGCGCGAC CGCCAGCGTG
CTGTTCATGT TGGTCAAGGC CGTCAACATG CTCATGTTCC TGCGCAAGGC GCCTCGCGAT
GGTGAACTTG CCTTTTCGAT TTCGAGTTTT TTTAAGCATA TCGGCCAAAA CAAAGGACGC
AAGCCTTGGA TATTCGTCCC CAGAAAGGAG GATTATTTCG AGTCCATGAA GCCTTTGATG
GCGTTGTGGC TGGAATGTGC GGCCAGTGCC ATGCTTGGCT TGTCAACCAG CCCCACCCAA
AGGGTCTGGT TCCTGCTGGA TGAGTTGGCC GACCTTCCGC GTGTCCAGAA CCTCGAACGC
CTCTTGCCGC AAGGGCGCAA ATTCGGCGCT TGTGCCGTCC TCTCCTTCCA GTCCATCGGC
CAAATGCGCG CTCGGTACGG TCACGATGGT GCAGAGGCGC TGCTAGGCTG CTGCAACACG
AAGCTATTTC TGCAAATGAG CGACCATGCG AGCCGGGAAT GGGCAGCCGC GAACATCGGC
AAGGTCGAGG TCGAAATTCC ATTGATGACG GAAACAGTCG ATCCCGAAAC CGGTAAGTTG
CAGCAATCCT TCACGACCGC CCGCGAAACT AGGCCGGCTG TTATCGAGAG CGATCTGCGC
TTGCCCAAAC ATACCGGCTA TCTGATGTTA CCTGACGGTT TGCCGGTGGC GCGGATCAAG
CTGACGAATG ACCATATTGT CGCGCGCGGC CCTGCCCGCC AGCTAGACTT CATCCCCGCC
GATATTGCGG AAGCGTTCTG GGGCGTATTG CAGGAGGCCC AGAAGGCCAA GACGGCCGAA
AGGCTTGAGG CGCCCATCCA AGGTACAATT CTTGGACCGG GGCCGGTATA A
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| Protein sequence | MSNYTKLAHA GARLTRKREI DRNKFYASVG GLLASALIGA AAAGYLMTSP TQAVQVVDYM
AADVAANLMK FVPINPEMTI EWRGRSYRTG VKEWAAFPPL RDQTFDALEN LAAGGAIGLA
AGWVGLWLSA GRRRRQMEAI LADRVVRGTK LVTEAELARL NANHATKPLL KFGSVTLPSQ
LENRHIAIIG TTGVGKTTVL RQQLDVIEAR GEAALVYDTS GEFLANYYNP ARGDIILNPF
DQRGVFWSPF AEIIHPADCD RISRYLITET GDEDKDIWLE TSRNLVANMI RNLWREGRGT
LEALLNALQA MPRQELERWL ANTSSARTFE KDAERATASV LFMLVKAVNM LMFLRKAPRD
GELAFSISSF FKHIGQNKGR KPWIFVPRKE DYFESMKPLM ALWLECAASA MLGLSTSPTQ
RVWFLLDELA DLPRVQNLER LLPQGRKFGA CAVLSFQSIG QMRARYGHDG AEALLGCCNT
KLFLQMSDHA SREWAAANIG KVEVEIPLMT ETVDPETGKL QQSFTTARET RPAVIESDLR
LPKHTGYLML PDGLPVARIK LTNDHIVARG PARQLDFIPA DIAEAFWGVL QEAQKAKTAE
RLEAPIQGTI LGPGPV
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