Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_2130 |
Symbol | |
ID | 5162154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | - |
Start bp | 2355464 |
End bp | 2356243 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640554053 |
Product | type III secretion system inner membrane R protein |
Protein accession | YP_001235248 |
Protein GI | 148261121 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCCGC ACGGCCTTGC CGATATGGTT TTCGGGCCGT TGCTGATTTT CATCAGAATT TCGAGTCTAG TCATGGCGCT GCCCTTCATG GGGGCGGGGA ATGCGCCGCC GCAGATACGC ATCGGGCTGT CGATCGCTCT TACGGCAATC GTGGCGCCGT TGATCGTCTC CGGTACGATT GGCGTTCCAT CCTCGATTCC GGTTTTCGTG TTTCTGGTTC TTCGTGAGAT CGTTGTCGGG CTATCTCTCG GCTGGCTCAC GGCGGCGATC ATGCTGAGCC TGCCCGTAGC GGGACAGATT ATTTCCTATC AGATGGGCCT GTCCAGCGTG TTGCTGCCGA ATGTCGAGAT TGGTCCGAAC AGCACGCTGG TGGCGAATGC CCTGAGCGTC ATGTTGCCGG CTGTAGTGTT CACCACCGGT CTTTTTATGT TGCCGGTCCT CGCCATAATC CGGTCGTTCC GGGTAATCCC GCTGACGTCG ACAATCATTG GCGCTCACCT TCCCCCGGCG GGGCTGCTGC TCGGCTTCGC TGTCCGGGCC GTGTCGGCAG AGTTCGTGAC GGCCTTGCAT CTTGCCGCGC CCTTTCTCTT CATCGGTCTC CTGTGGCAAG CCGGTCTTGG ACTGATGTCC AAGGTCGCCC CGAGCATGCA GGTTTATTTC GTTGCCGCCC CGCTGCAGCT GCTTGGCGGC ATGTTTCTGC TCGCGATCCT CGCCTCCCCG ATGCTCACTG TCTGGCAGGA TGCGATGCTG CCGCTTCTGC ATGCTTACGC GAGCTGGTGA
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Protein sequence | MFPHGLADMV FGPLLIFIRI SSLVMALPFM GAGNAPPQIR IGLSIALTAI VAPLIVSGTI GVPSSIPVFV FLVLREIVVG LSLGWLTAAI MLSLPVAGQI ISYQMGLSSV LLPNVEIGPN STLVANALSV MLPAVVFTTG LFMLPVLAII RSFRVIPLTS TIIGAHLPPA GLLLGFAVRA VSAEFVTALH LAAPFLFIGL LWQAGLGLMS KVAPSMQVYF VAAPLQLLGG MFLLAILASP MLTVWQDAML PLLHAYASW
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