Gene Acry_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcry_2000 
Symbol 
ID5161250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidiphilium cryptum JF-5 
KingdomBacteria 
Replicon accessionNC_009484 
Strand
Start bp2191834 
End bp2193678 
Gene Length1845 bp 
Protein Length614 aa 
Translation table11 
GC content71% 
IMG OID640553921 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_001235119 
Protein GI148260992 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGTC TGTTCGACGA CGACGAGACG GACGATCAGC CTAGGTCCGA GCCGCCGCCG 
CCGGGACCGT CGCTGTTCGG CGACGACGAA TTGCCCGAGG CCGCCGCCCC GGTCCATGCC
GAGTCCTACC GCGTCCTCGC CCGCAAATAC CGCCCGACCA CCTTCGACGA CCTAATCGGC
CAGGACGGGC TGGTCCGCAC CCTGCGCAAC GCCTTCGCGA TGAACCGCAT CGCCCACGCC
TTCATGCTCA CCGGCGTGCG CGGTGTGGGC AAGACGACGA CGGCGCGGAT TCTCGCCCGC
GCGCTGAACT GCACCGGGGC GGACGGGCAG GGCGGTCCCA CGCCCGATCC CTGCGGCGTG
TGCGATAATT GCGTGGCGAT CCTCGCCGAC CGCCACCCCG ACGTGGTGGA GATGGACGCG
GCCTCGAACA CCGGGGTCGA CGACGTGCGC GAGATCATCG AGGCGACGCG CTTCCGCCCG
ATGATCGCCC GCACCAAGGT GTTCATCGTC GACGAGGTCC ACATGCTCTC GCGCAACGCG
TTCAACGCGC TGCTCAAGAC GCTGGAGGAA CCGCCGCCGC ACGTGAAATT CGTGTTCGCC
ACCACGGAAA TCCGCAAGGT GCCGATCACC GTGCTCTCGC GCTGCCAGCG TTTCGACCTC
AAGCGCGTGC CGGTCGATGT GCTGGCCGCG CATTTTGCCC GCATCGCGGA GAAGGAGGCG
GTCGCGGTCG AAGGTGGCGC GCTCGACGCC GTCGCGCGCG CCGCCGACGG GTCGGTGCGC
GACGGGCTCT CCCTGCTCGA CCAGGCGATC GCCCGGGCCG ATGAGGGGGC ACCGGTCACG
GCCGAACTGG TGGCCGATAT GCTCGGCCTG GCCGATCGCG GCATGGTCTT CGATCTGCTG
GAGGCCGTCG CCGCCGGCGA TCCCGCCGGT GCGCTCGGCG TGATGGACCG CGCGCATGAA
GCCGGCGCCG ATCCGGTATT GGTGATGCAG GATCTGCTCG GCCTCGCCCA TACGCTCTCG
CGCCTGAAGG CGATCCCGGC CCTGGCCGAG GGCAGCGAAT TGCCCGAGCT CGACCGCGCC
CGCGGCGCGC CGCTGGCCGC GCGGCTTTCG GTGCCGTTTC TCGGCCGCCT CTGGCAGATG
CTGCTCAAGG GCGTCGCCGA GGTGGAGCAG GCGACCGACC GGCGCGCCGC CGCCGACATG
ATCCTGATCC GCCTCTGCTA CGTGTCCGAC CTGCCGCCAC CCGGCGAACT GGTTCGGCGC
CTGTCTGGCG AGGGGACGGT GGCCCGCGGC AATGCCGTGC CCGCGTCCGC GCCCGGCCCG
GCCCCAAGGG CGGTGGTGAA CGGCGCCCCG GTCGCGCCGG CCGAGACCGC CCCGGCAACG
GCCCCGCGCC TTGCCCGGTT CGAGGACGTG ATTGCCCTGG CCGGCGAGAA GCGGGACGCC
TTGCTCTATG CCCATCTCCG CCACGATGCC CGGCTGGTGC GGTTCGCGCC GCCGGTGATC
GAACTGAACC TTACCCCCGA GGCGCCTCGC GATCTTTCGT CCCGCCTCGC CAGGTTTCTC
GAGGCGGAAA CCGGACGGCG ATGGACCATC GCCCTATCCC GCGCCGCCGG CGCACCGAGC
ATGGTCGAGG CCGAAACCAC GGCACGCGAG ACGGCGCGCA ACGAGGCACT CGACCATCCG
CTGGTCAGGG CCATCTTCGA GACGTTTCCT GGGGCGAAGA TCGCGAGCGT CGAGGTCGAC
GCGCCGCCCG CCCTTGCGGA GCCGCCCGTG ATGGATGATG ACCGCTTCGA CGATGTCCCG
CCGATTTCCG ACGACGACAT CGCCGATGCC ATGGAGATCG ACTGA
 
Protein sequence
MAGLFDDDET DDQPRSEPPP PGPSLFGDDE LPEAAAPVHA ESYRVLARKY RPTTFDDLIG 
QDGLVRTLRN AFAMNRIAHA FMLTGVRGVG KTTTARILAR ALNCTGADGQ GGPTPDPCGV
CDNCVAILAD RHPDVVEMDA ASNTGVDDVR EIIEATRFRP MIARTKVFIV DEVHMLSRNA
FNALLKTLEE PPPHVKFVFA TTEIRKVPIT VLSRCQRFDL KRVPVDVLAA HFARIAEKEA
VAVEGGALDA VARAADGSVR DGLSLLDQAI ARADEGAPVT AELVADMLGL ADRGMVFDLL
EAVAAGDPAG ALGVMDRAHE AGADPVLVMQ DLLGLAHTLS RLKAIPALAE GSELPELDRA
RGAPLAARLS VPFLGRLWQM LLKGVAEVEQ ATDRRAAADM ILIRLCYVSD LPPPGELVRR
LSGEGTVARG NAVPASAPGP APRAVVNGAP VAPAETAPAT APRLARFEDV IALAGEKRDA
LLYAHLRHDA RLVRFAPPVI ELNLTPEAPR DLSSRLARFL EAETGRRWTI ALSRAAGAPS
MVEAETTARE TARNEALDHP LVRAIFETFP GAKIASVEVD APPALAEPPV MDDDRFDDVP
PISDDDIADA MEID