Gene Acry_1931 details

Gene Information

• Locus tag: Acry_1931
• Symbol: rplF
• ID: 5160412
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: -
• Start bp: 2125159
• End bp: 2125692
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 640553852
• Product: 50S ribosomal protein L6
• Protein accession: YP_001235051
• Protein GI: 148260924
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.551471
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACGAG TTGGTAAATA TCCGGTCGCG CTGCCGCAGG GTGTGTCGAT CACCGTGGTC 
GACGGCATCC TGACCGCGAA GGGCAAGCTG GGCGAGCTGA AGATGCCCCT GTCCGAGCGG 
GTCGAGACGG TGGTCGAGGA CGGCAAGGTG ACGGTGTCGC CGCGCGACAA GGAAGCGGCC 
TCGCGGATGA TGTGGGGCAC CACCCGCGCC AATGTGGCCA ACATGGTCCA GGGCGTTTCG 
CAGGGCTACG CCAAGACGCT CGAGATCAAC GGCACGGGTT TCCGCGCCGC GGTCCAGGGC 
AGCAACCTGG TGATGAATCT CGGCTTCTCG CACGATGTGG TCTATCCGGT GCCGCAGGGC 
ATCAAGATCA CCTGCGAAAA GCCGACCTCG ATCAAGGTCG AGGGTATCGA CAAGCGTCTG 
GTCGGGCAGG TCTGCGCCGA GCTCCGCGCC TTCCGTCCGC CCGAACCCTA CAAGGGCAAG 
GGTGTGAAGT TCGAGGGCGA GGCGATCCGC CGCAAGGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRVGKYPVA LPQGVSITVV DGILTAKGKL GELKMPLSER VETVVEDGKV TVSPRDKEAA 
SRMMWGTTRA NVANMVQGVS QGYAKTLEIN GTGFRAAVQG SNLVMNLGFS HDVVYPVPQG 
IKITCEKPTS IKVEGIDKRL VGQVCAELRA FRPPEPYKGK GVKFEGEAIR RKEGKKK