| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_1762 |
|---|
| Symbol | |
|---|
| ID | 5162271 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | - |
|---|
| Start bp | 1944851 |
|---|
| End bp | 1945378 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640553678 |
|---|
| Product | RNA chaperone Hfq |
|---|
| Protein accession | YP_001234884 |
|---|
| Protein GI | 148260757 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1923] Uncharacterized host factor I protein |
|---|
| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.683558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCCGC CACAAGCGTT TTTTTATCCC ATGCCGGGCG CTTCCGATTG GTTTCGGCGC
CCCGGCGAGC TATATCTCCG CCTGCGGCAT CCGTTTGCGG GCTCTCCGAA CGGGCGGGGC
CGAACATGCG GCAGCGGGTT CCGGCCCGAT GCCATGACCC GATGCACCCA CGCCATGGCA
ACCGCCATGC CCGGCAAGAA AAAAAGGACT CCAGACGTGG CCAACGAAAA ATCGCAGAAC
GTGCAGGATG TCTTCCTCAA TCACGTTCGC AAGAGCAAGA CCCCGGTCAC CGTGTTCCTG
GTGAACGGCG TGAAGCTCCA GGGTGTGATC ACCTGGTTCG ACAATTTCTC CGTCCTCCTC
CGCCGCGACG GGCACACCCA GCTCGTCTAC AAGCACGCGA TCTCGACCGT GATGCCCGGC
GCGCCGATCC AGCTCTTCGA CGCGACCAAG GCCGAGGGCG CCGCGCCGGC GGGCGGCTCC
ACGCTCAGCC TCGGCCGCGC CGGCGACCCC GACCGCGACG CCGGGTAG
|
|---|
| Protein sequence | MHPPQAFFYP MPGASDWFRR PGELYLRLRH PFAGSPNGRG RTCGSGFRPD AMTRCTHAMA
TAMPGKKKRT PDVANEKSQN VQDVFLNHVR KSKTPVTVFL VNGVKLQGVI TWFDNFSVLL
RRDGHTQLVY KHAISTVMPG APIQLFDATK AEGAAPAGGS TLSLGRAGDP DRDAG
|
|---|
| |