Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acry_1188 |
Symbol | |
ID | 5161083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidiphilium cryptum JF-5 |
Kingdom | Bacteria |
Replicon accession | NC_009484 |
Strand | + |
Start bp | 1323725 |
End bp | 1325557 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640553103 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001234319 |
Protein GI | 148260192 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCCCCG TGCTGGACCT CGACCGGCTT TCGGTCACGC TGCGCCGGCG CGACGGCACC CGCCTCGCGC TGCTGGAGGG ACTGAGCCTC TCGGTCGCGG CGGGCGAAAT GACCGCGCTG GTCGGCGAGA GCGGCTCGGG CAAGACGATC GCCGCACTCG GCATGATCGG CCTGCTGCCG CGCCGGGCGG AAGCTACCGG CCGGGTCCTG CTGGCCGGCA CCGATCTACT GACACTTCCG CGGGAAAAAA TGCGACGGGT GCGCGGCGGC GAGATCGGGA TGGTGTTCCA GAATCCGCTC GCCGCCCTCA ACCCGGCGAT GCGGGTGGGC AGGCAGGTCG AGGAAGTCTA CCGCCTTCAT ACCGGCGCCG GGCCGGATGC CGCGCGGGCG CAGGCGCGGG CGCTCTTCGA CGAGGTCGGG ATTCCGCGCG GCGCCGAGCG GCTGGACGAT TTCCCGCACC AGTTCTCGGG CGGGATGCGG CAGCGGGTGA TGATCGCGAT GGCGCTGGCC TGTGGTCCGA GGCTCCTGAT CGCCGACGAG CCGACCACCG GGCTTGATGC GCTGGTCGCA CGGCAGATCC TAGCGCTGAT CACGCGACTG TGCCGGGAAC GGGGCATGGG CGTGCTGTTC ATCACGCACG ACCTCTCGAT CGTCGAGGCG CATGCAGCGC GGGTGACCGT GCTCTATGCC GGGCGGGCGG TGGAATGGGG CCGCGCCGCC GACCTGTTCG CGACGCCGCG CCACCCCTAC ACACGCGCCC TGCTCGGTGC GGTACCGGGG CCTGAGCAGG CGCGGCTGGT CACCATTCCT GGCACCCTGC CCGATCCAGC GGCATTTCCG CCGGGTTGCC GGTTCGCTCC GCGCTGCGTC CTGCGCGAGG CCGCCTGCGA GGCAGGGTTT CCCGCGACGG ATACGCTGGG CGGGACCGCC TTCGCCTGCC GTCGCGGCCG CGAGCCGTCG CCGGTGCCGG AACGGAACAC GACGCGCGTT GCCCCACAGG TGGAGGCGGC AGGCGAGCCG GTTCTGGAGG TTTCGGAACT GCGCGTCGAA TATGACCGCC GCCGATCGGA CTTCGCTTTC CGGCGTCCAC CGCCACTTCT CGCCCTCGCC CCGGTTTCCT TTACGCTGCG GCGGGGCGAA TGCCTCGGCG TGGTTGGCGA GAGCGGATCG GGCAAGTCGA GCCTCGGCCG CGCGGTGCTG CAGATGCTGG CGCACGAAGG CACGGTACGG CTCGGCGGTG CCGACCTCGA GAGGATGCGC GGCAAGGCGC TTGCCGCGGC AAGGCGGCGC ATCCAGGCGG TATTCCAGGA TCCGCGCGAG TCGATGAACC CGCGTATGCG GATCGGCGAC ATCGTGGCCG AGCCGCTGCG CCTCGCTGGC GTCCGCAAGC ACGAGAGACG CGCGCAGGCC GCGGCGTTGC TCGACCGGGT CGGGCTCGGC GCGCGCCTGT TCGACCTGTT GCCCGGCCAG GTCTCGGGCG GCGAGGCCCA GCGCGTGGCG ATCGCCCGCG CGCTGGTGGC GGCGCCGGAT GTCATCGTGC TTGATGAACC GACGTCGAGC CTCGATGTGT CGACCCAGGC GCTGCTGCTC AACCTGCTGA AAGACCTCGC AAGTGATGAG GGGCTCTCCT ACATCCTGAT CAGCCACGAT ATCGCGACGG TGTTCCACAT GGCCGACCGC CTGCTCGTGC TGCGGGAAGG CCACGTCATC GAGGCCGGGG TCGCGGGGGA TTTACTTGCC GGTGCGAAAT CCGACTATAC GAAGGAACTG ATCGCTGCCG GCGCGTCCGC GCGCTGGCGC GGGCCCGAAC ACACCGAGGA GCTTAGCTCA TGA
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Protein sequence | MSPVLDLDRL SVTLRRRDGT RLALLEGLSL SVAAGEMTAL VGESGSGKTI AALGMIGLLP RRAEATGRVL LAGTDLLTLP REKMRRVRGG EIGMVFQNPL AALNPAMRVG RQVEEVYRLH TGAGPDAARA QARALFDEVG IPRGAERLDD FPHQFSGGMR QRVMIAMALA CGPRLLIADE PTTGLDALVA RQILALITRL CRERGMGVLF ITHDLSIVEA HAARVTVLYA GRAVEWGRAA DLFATPRHPY TRALLGAVPG PEQARLVTIP GTLPDPAAFP PGCRFAPRCV LREAACEAGF PATDTLGGTA FACRRGREPS PVPERNTTRV APQVEAAGEP VLEVSELRVE YDRRRSDFAF RRPPPLLALA PVSFTLRRGE CLGVVGESGS GKSSLGRAVL QMLAHEGTVR LGGADLERMR GKALAAARRR IQAVFQDPRE SMNPRMRIGD IVAEPLRLAG VRKHERRAQA AALLDRVGLG ARLFDLLPGQ VSGGEAQRVA IARALVAAPD VIVLDEPTSS LDVSTQALLL NLLKDLASDE GLSYILISHD IATVFHMADR LLVLREGHVI EAGVAGDLLA GAKSDYTKEL IAAGASARWR GPEHTEELSS
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