Gene Acry_1040 details

Gene Information

• Locus tag: Acry_1040
• ID: 5159983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidiphilium cryptum JF-5
• Kingdom: Bacteria
• Replicon accession: NC_009484
• Strand: +
• Start bp: 1157682
• End bp: 1159583
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 640552958
• Product: polysaccharide biosynthesis protein CapD
• Protein accession: YP_001234175
• Protein GI: 148260048
• COG category: [G] Carbohydrate transport and metabolism; [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1086] Predicted nucleoside-diphosphate sugar epimerases

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGTTGC AGCGCAGCCA GATCCGCATC GCGGTCAATT TCGCCCTCGA CGGTCTGCTG 
GCCGCGCTGG CGGTGATCGG CGCCTGCTGG CTCGCCGATC CGGCGCATCC GATGCCCTCG 
CCGGCGGTCC TGCCGCTGGC CGGGTCGGCG GCGATCTGGC TGGTCGGCGT GCCGTTCGGC 
CTCGCCCGGC AGCACTGGCG CTTCACCGCC CTGCCCGACG CGATCGCGGT GGGGGCGAGT 
GCGGTGTTCG CCGCGCTGCT GCTCGTGCTG CTGCTCGTCG GCGTCGGCGC CAGGCTTCCC 
TCGGCGAGTT TTCCGCCGCT GCTGATGATC ACGCTCGGCC TCGCGCTGCT GGCGCCGCGC 
GTGCTCTACC GGATGGCGCG CAGCCGCCGC GAGGTGCTGT CGGACGATGC CGAGACCGCG 
CTGCTGCTCG GCGATGGCGA GGGCGCGGAA CTGTTCCTCG CCGCCCTGTC GCGCGAGAGC 
CACCAGCGCT ACCGGGTGAT CGGCGTGCTG GCGGGCTCGG CGCGGGAGAC CGGCCGGCGC 
ATCCATAACG TGCCGATCCT CGGCGAGGTG AGCGGGCTGG CGGCGGCGCT CGACCGGCTG 
GCCGAGGCCG GGCAGATGCC GGCCGTGCTG GTGGTGGCGA GCCGCGAGCT CGTCGGCCCG 
GCGCTGCGCG AGATCATGGA CGAAGCCGAG CGCCGGGGCA TCCGCGCCGC CCGCGCGCCG 
CGGCCGACCA CGCTCTCGCC CACCACGCCG GGCGAGCCGG AGACCGCGCT GCGGCCGATC 
GCCATCGAAG ACCTGCTCAA CCGCCCGCAG GTCGCGCTCG ACCGCGAGGG CATGGCGCGG 
ATGATCCAGG GACGCTGCGT GCTGGTGACC GGCGCCGGCG GGTCGATCGG CTCGGAACTG 
GCCCGCCAGG TCGCGGGGTT CGGACCGGCG CGGCTGATCC TGCTCGATTC GAGCGAGTTC 
GCGCTGTGGC GGATCGATCT CGAACTCTCG GAGCAGGTGC CGGGCCTGGC GCGCGCGGCG 
GTGATCGCCG ATGTCCGCGA CCGCGCGCGG ATCGAGGCGC TCTGCGCCGA ATGGCGGCCG 
GACCTCGTGT TCCACGCGGC GGCGCTGAAG CATGTGCCGA TCGTCGAGGC CAATCCGCTG 
GAGGGCATCG CCACCAACGC GCTCGGCACC CGCAACGTGG CCGATGCCGC CCGCGCCGCC 
GGCGCCGGGC TGATGGTGCT GATCTCGACC GACAAGGCGG TGAACCCGTC CTCGGTGATG 
GGCGCGTCGA AGCGGCTGGC GGAGATGTAT GCCCAGGGGC TCGACGTCGC GGCGCGGCGG 
CAGGCGGGGA TGCGCATCGT CACCGTGCGG TTCGGCAACG TGCTGGGCTC GACCGGCTCG 
GTGGTGCCGC TGTTCCGCCG CCAGCTCGCC CGCGGCGGGC CGCTGACGGT GACGCATCCC 
GACATGCGGC GTTATTTCAT GACGGTGCGC GAGGCGGTCT CGCTCGTGCT GCAGGCCGCC 
GTGGTCGGCC GCTCGGACGC GGCGCTGCCG GTCGCACAAG GCGGGATCTT CGTGCTCGAC 
ATGGGCGAGC CGGTGAAGAT CGTCGATCTC GCGCGGCAGA TGATCCGCCT CGCCGGGCTC 
AGGCCCGATC TCGACATCCC GATCCGCTTC ACCGGGCTCA GGCCGGGAGA AAAGCTGTTC 
GAGGAGCTGT TCCACGGCGC CGAACGGCCG ATCGAGACCG GGTTTCCCGG CCTGCTGATG 
GCCGCCCCGC GGGTGGCCGA CGCCGCCCTG GTCGGCCGGG CCTTCGACGA GCTGGCCGCC 
CTGATCCAGC GCGGCGAGGC GGCGGCCGCG CTCGCGGCGC TGGCAAGGCT GGTGCCGGAG 
TTCGGCGCGC AACCCCTCGC CGCGGCGGGC CCGACCGGCT AG 

 

Protein sequence

MTLQRSQIRI AVNFALDGLL AALAVIGACW LADPAHPMPS PAVLPLAGSA AIWLVGVPFG 
LARQHWRFTA LPDAIAVGAS AVFAALLLVL LLVGVGARLP SASFPPLLMI TLGLALLAPR 
VLYRMARSRR EVLSDDAETA LLLGDGEGAE LFLAALSRES HQRYRVIGVL AGSARETGRR 
IHNVPILGEV SGLAAALDRL AEAGQMPAVL VVASRELVGP ALREIMDEAE RRGIRAARAP 
RPTTLSPTTP GEPETALRPI AIEDLLNRPQ VALDREGMAR MIQGRCVLVT GAGGSIGSEL 
ARQVAGFGPA RLILLDSSEF ALWRIDLELS EQVPGLARAA VIADVRDRAR IEALCAEWRP 
DLVFHAAALK HVPIVEANPL EGIATNALGT RNVADAARAA GAGLMVLIST DKAVNPSSVM 
GASKRLAEMY AQGLDVAARR QAGMRIVTVR FGNVLGSTGS VVPLFRRQLA RGGPLTVTHP 
DMRRYFMTVR EAVSLVLQAA VVGRSDAALP VAQGGIFVLD MGEPVKIVDL ARQMIRLAGL 
RPDLDIPIRF TGLRPGEKLF EELFHGAERP IETGFPGLLM AAPRVADAAL VGRAFDELAA 
LIQRGEAAAA LAALARLVPE FGAQPLAAAG PTG