| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acry_0856 |
|---|
| Symbol | |
|---|
| ID | 5160478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidiphilium cryptum JF-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009484 |
|---|
| Strand | + |
|---|
| Start bp | 944300 |
|---|
| End bp | 945811 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640552772 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_001233994 |
|---|
| Protein GI | 148259867 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0104833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCACC CACAGGAAGA CGCCGCCGCC GAGGCTGCCG AAACGCCGCC CGCCTCCGGC
TTCGCGTCGC TCGGCCTGTC CGAGCCGATC CTCAAGGCCC TTGAGGAAAA GGGCTATCTG
AACCCGACCC CGATCCAGGA ACAGGCGATC CCGACCGTGC TCATGGGGCG GGACGTTCTC
GGCTGCGCGC AGACCGGCAC CGGCAAGACC GCGAGCTTCA CCCTGCCGAT GCTCGACATT
CTCTCCGGCT CCCGCGCCCG GGCGCGGATG CCGCGCTCCC TCATCCTCGA GCCGACGCGC
GAGCTCGCCC TCCAGGTCGC CGAGAATTTC GTCCAGTACG GCAAGCACCT GAAGCTCAAC
CATGCGCTGC TGATCGGCGG CGAGAGCATG GGCGAGCAGC GCGACGTGCT GACCCGCGGG
GTCGACGTGC TGATCGCCAC CCCCGGCCGC CTGATCGACA TCTTCGAGCG CGGCGGCCTG
CTGCTGTCGG ACGTGCGGGT GCTGGTGATC GACGAGGCCG ACCGCATGCT CGACATGGGG
TTCATCCCCG ATATCGAGCG GATCGTCTCC CTCCTGCCAA CCATGCGGCA GACGCTCTTT
TTCTCCGCCA CCATGGCCCC GGAGATCCGC CGCCTGGCCG ACGCGTTCCT CTCGAACCCG
AAGCAGATCA CCGTCTCCCG CCCGGCCACC GTCGCCACCA CGATCACCGA AGGCCTGTCG
CTGGTCGCCA CGCACGACAA GCGCGAGGCC CTGCGCCGGC TGATCCGTAC CGAGGACGTG
CAGAACGCGC TCGTCTTCTG CAACCGCAAG CGCGATGTCG ACATTCTCTG CAAGTCGCTG
ACGCGGCACA AATTCTCGGC CGGCATGCTG CATGGCGACA TGCCGCAATC CGCCCGCTTC
GCGACCCTCG AGCGCTTCAA GGCCGGCGAG ATCCGCCTGC TGGTCTGTTC CGACGTCGCC
GCCCGCGGCA TCGATATCGG CGGTCTGTCG CATGTCTTCA ATTTCGACGT CCCGCACCAC
GCCGAGGATT ACGTCCACCG CATCGGCCGC ACCGGACGGG CGGGAATGCA GGGCCGCGCC
CTGACCCTGG CCACGCCGGC CGACCGCGCC GCGGTCGACG CGATCGAATT GCTGATCGGC
CACCCGATTC CCCGCCTCGC CGTGGACGGT CTCGATCCCG TCGAGTGGGA GGAGGCCGAG
TCCAGGGGCC GCCGCCGGGG CGGCAAGCCC GCCGCCAAGG CCGCGCCGCC GGCGAAGAAG
GCGCCCAAGC CGGCCGCCCG CGCCGAGACC CCGCCCGCCG CCGAGGAACA GCCCGCCCCC
CGCCGCAGCA GGGAGCCGGG CAACCGCCGC GGCGGCCGCG AGGATGCCGG CCCGCGCGAG
CCGGTCGTCG GCTTCGGCGA TGACATTCCG GCCTTCATGC AGATCCGCCG CCGCGCCCGC
CCGGCGGCCG GACCGGATAC CGACGGGCAG GACGGAAAAG ACCAGAACGA GGATACGGAA
ATCGCCGCAT GA
|
|---|
| Protein sequence | MPHPQEDAAA EAAETPPASG FASLGLSEPI LKALEEKGYL NPTPIQEQAI PTVLMGRDVL
GCAQTGTGKT ASFTLPMLDI LSGSRARARM PRSLILEPTR ELALQVAENF VQYGKHLKLN
HALLIGGESM GEQRDVLTRG VDVLIATPGR LIDIFERGGL LLSDVRVLVI DEADRMLDMG
FIPDIERIVS LLPTMRQTLF FSATMAPEIR RLADAFLSNP KQITVSRPAT VATTITEGLS
LVATHDKREA LRRLIRTEDV QNALVFCNRK RDVDILCKSL TRHKFSAGML HGDMPQSARF
ATLERFKAGE IRLLVCSDVA ARGIDIGGLS HVFNFDVPHH AEDYVHRIGR TGRAGMQGRA
LTLATPADRA AVDAIELLIG HPIPRLAVDG LDPVEWEEAE SRGRRRGGKP AAKAAPPAKK
APKPAARAET PPAAEEQPAP RRSREPGNRR GGREDAGPRE PVVGFGDDIP AFMQIRRRAR
PAAGPDTDGQ DGKDQNEDTE IAA
|
|---|
| |