Gene Acid345_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4730 
Symbol 
ID4070668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5593590 
End bp5594450 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content57% 
IMG OID637986774 
Productcyclic nucleotide-binding protein 
Protein accessionYP_593803 
Protein GI94971755 
COG category[S] Function unknown
[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.813554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.722063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAG ATCCGCTCTT ATTGGCCGAG GTTCCTATCT TCTCGCTGCT CGACGAGCAG 
GAGCGCGAAA CCCTGATCGG ACTCCTGGAG CACCAAACCG TAAAGGAAGG CGAACTCATC
TTTCGCACCG GCGATCATCC GGACGCCCTC TACGTTATTG CTGATGGCAA GGTGGAACTC
TTCATTCACG ACGATGCTGG ACGCAAGATC GCCCTCGACG AACTTGGCCC CGCAGATGTT
GTGGGCGAAG TTTCCTTCAT GGACGGCGGA CCGCGCACGG CCAGCTCCGC AGCCCTCACT
CCTACGAGGC TACTGCGCTT CGAGCGCGAA TCGTTGCTGG AATTTGTTAC CCGGCACCCT
CATGCAGCGA TCGACCTGCT TACCATGATG GGCAAGAGGC TTCGCTCGGC TGATGAGATG
CTGCGCCACA CCGTAGTGCA AAATGCGAAT ATCGTTGAAG AAGACCAGTT GACCTTCGGA
CAGCGTATTG CGGACCAGGT TGCGACCTTC GGCGGTTCGT GGACTTTCAT CATCACCTTC
GGCACGGTGT TAGTCGTATG GGTGATCGTG AATGTCATCC TGCTGAGCAA GCCCTTCGAT
CCGTATCCGT TCATCCTTCT GAACTTGGTG CTCTCGATGC TGGCAGCCTT GCAAGCGCCG
GTGATCATGA TGAGCCAGAA CCGCCAGTCG GCTAAAGACC GCCTGAATTC GGACCTCGAT
TTCAAGGTGA ACCAGAAGGC GGAACTCGAG ATCGCGCACC TGCACAAAAA GGTGGATCAG
CTCTACGAAG TCACGCAGCA GCACTGGGCG CAGCGCGACA AAGAACACCG CTCAGGTGGC
CAGGGCAAAC CCGCCAACTG A
 
Protein sequence
MAADPLLLAE VPIFSLLDEQ ERETLIGLLE HQTVKEGELI FRTGDHPDAL YVIADGKVEL 
FIHDDAGRKI ALDELGPADV VGEVSFMDGG PRTASSAALT PTRLLRFERE SLLEFVTRHP
HAAIDLLTMM GKRLRSADEM LRHTVVQNAN IVEEDQLTFG QRIADQVATF GGSWTFIITF
GTVLVVWVIV NVILLSKPFD PYPFILLNLV LSMLAALQAP VIMMSQNRQS AKDRLNSDLD
FKVNQKAELE IAHLHKKVDQ LYEVTQQHWA QRDKEHRSGG QGKPAN