Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_4730 |
Symbol | |
ID | 4070668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 5593590 |
End bp | 5594450 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637986774 |
Product | cyclic nucleotide-binding protein |
Protein accession | YP_593803 |
Protein GI | 94971755 |
COG category | [S] Function unknown [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG4420] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.813554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.722063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGCAG ATCCGCTCTT ATTGGCCGAG GTTCCTATCT TCTCGCTGCT CGACGAGCAG GAGCGCGAAA CCCTGATCGG ACTCCTGGAG CACCAAACCG TAAAGGAAGG CGAACTCATC TTTCGCACCG GCGATCATCC GGACGCCCTC TACGTTATTG CTGATGGCAA GGTGGAACTC TTCATTCACG ACGATGCTGG ACGCAAGATC GCCCTCGACG AACTTGGCCC CGCAGATGTT GTGGGCGAAG TTTCCTTCAT GGACGGCGGA CCGCGCACGG CCAGCTCCGC AGCCCTCACT CCTACGAGGC TACTGCGCTT CGAGCGCGAA TCGTTGCTGG AATTTGTTAC CCGGCACCCT CATGCAGCGA TCGACCTGCT TACCATGATG GGCAAGAGGC TTCGCTCGGC TGATGAGATG CTGCGCCACA CCGTAGTGCA AAATGCGAAT ATCGTTGAAG AAGACCAGTT GACCTTCGGA CAGCGTATTG CGGACCAGGT TGCGACCTTC GGCGGTTCGT GGACTTTCAT CATCACCTTC GGCACGGTGT TAGTCGTATG GGTGATCGTG AATGTCATCC TGCTGAGCAA GCCCTTCGAT CCGTATCCGT TCATCCTTCT GAACTTGGTG CTCTCGATGC TGGCAGCCTT GCAAGCGCCG GTGATCATGA TGAGCCAGAA CCGCCAGTCG GCTAAAGACC GCCTGAATTC GGACCTCGAT TTCAAGGTGA ACCAGAAGGC GGAACTCGAG ATCGCGCACC TGCACAAAAA GGTGGATCAG CTCTACGAAG TCACGCAGCA GCACTGGGCG CAGCGCGACA AAGAACACCG CTCAGGTGGC CAGGGCAAAC CCGCCAACTG A
|
Protein sequence | MAADPLLLAE VPIFSLLDEQ ERETLIGLLE HQTVKEGELI FRTGDHPDAL YVIADGKVEL FIHDDAGRKI ALDELGPADV VGEVSFMDGG PRTASSAALT PTRLLRFERE SLLEFVTRHP HAAIDLLTMM GKRLRSADEM LRHTVVQNAN IVEEDQLTFG QRIADQVATF GGSWTFIITF GTVLVVWVIV NVILLSKPFD PYPFILLNLV LSMLAALQAP VIMMSQNRQS AKDRLNSDLD FKVNQKAELE IAHLHKKVDQ LYEVTQQHWA QRDKEHRSGG QGKPAN
|
| |