| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4570 |
|---|
| Symbol | |
|---|
| ID | 4071515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | + |
|---|
| Start bp | 5417288 |
|---|
| End bp | 5417587 |
|---|
| Gene Length | 300 bp |
|---|
| Protein Length | 99 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637986610 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_593644 |
|---|
| Protein GI | 94971596 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.27714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATA TCTTTAAAAA TATAGGAAGT CTCATTCGCG CGGAGCGATT GCGGCGTGGG
CTGACCCAAA CTGAATTAGC CTCGCACGTC CGCATGCCGC AAAGCCAACT TTCCCGCATC
GAGAAGGGCG CAAATGTAAG CCTCTCGACG TTAGCGGAAA TATCGCGAGC GCTCGACCTT
GAGCCAATGC TCATTCCCAA GCGCCTGTTA CCGGCGGTCA ACCACATTAT TGGATATACG
ACATCCGGTG ACCCGGAGGC ACAACGACCT CCCTCCCTGG TTAGCCATGA AGAAGACTAG
|
|---|
| Protein sequence | MEYIFKNIGS LIRAERLRRG LTQTELASHV RMPQSQLSRI EKGANVSLST LAEISRALDL
EPMLIPKRLL PAVNHIIGYT TSGDPEAQRP PSLVSHEED
|
|---|
| |