Gene Acid345_4449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_4449 
Symbol 
ID4070932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp5282045 
End bp5283271 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content61% 
IMG OID637986488 
Producthypothetical protein 
Protein accessionYP_593523 
Protein GI94971475 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTG ATTTCCAAAA CCGTTTGCGC AAGAACCTGG AACATCCCGT TCCGGCAGAG 
CACCCTGCTC CCGATGTGCT GAATGCGTAC ATCGAGAAGG TGCTCACCGG GGCAGAGGAG
CGCCAGGTAA CGGAGCATCT CGCGGCCTGC AGGGAGTGCC GCGAGGTGGT GTTTCTTGCG
ACGGGCGCAG CTGAGGAGCC CGTGCAGCCG GTGGTCGCCG CTGTTCCAGT GAAGCGGGTG
CGCTGGTGGG CGTGGGCGAT GCCGATTGTT GCGGTAGTCG TAATTGCCAT CTTCATTGGT
CAACCGTCGC TGCTCAGAAG CAAGCACACT GTAGAAATGG CGCAGGCGCG GCACGATGAA
CCGCAAGTTC CGGCTTCGAC GACAGTTGCG ACAAAGACAG AGGTTGCGCC AGCGAACAAA
GAAGAAGATA AAGCCAAGTC TCTCGAGACC TATCAACCAC GAAAGCGGAT TGTGCCGGCA
CAGCCGCTTG GTGGACTTGC GACATCCCCG GCCGCGCCAC CATCGCCAGC TCCGACTGAG
CGGCGTGAGT TGGCAAAAGA GAAAGACGTA AACGGACCAG TGCAAAACGA AATGGCTCGT
CGAGCGGGGG TGGGAGGAAG GATCGCAGAG GAAGCCAAGC CGGCGGTCGC GATGAGTGCA
CCCGCGCCTG CTGCGGCAGA CAAAGTCCAG ACCTTAAAAC AATCGGAGGG AGCTGCGGCG
GCAAATTTGC AGCAAGATTC GAAGCTGCGG GATGACCGAT ACGCGTACAG CACGGAGTCA
ACCAACGGCG CATCCCTGTC GGCGAATGGC GCAAGCCGCA GCAAGGCCGC CAATCTCGAC
ACCAAGGCCG GACAGGCGTT TGGGGGCTTC GCGAAATCCG CGGCGAAGAA AGTAGATGCA
GCGACGCAAT GGCGCGTCAC CACCACGGGC GGGCTCGAGC ACGCCCTGCT CGGCGAATGG
AAGCCCGCGC TTGGCGACTC CAGTTCGCAC TTTCTTGCTG TCACGACCTT CGGGGAAAAC
GTGTGGGCCG GCGGGAAGAA CCTCGCCCTC TATCACTCGC CTGACAACGG AGTGACCTGG
GAGCGGCAGA CGCTGCGAGT GCGGATCGCC GCGGACATAA CGCAGATCCA GTTCACCTCG
GCAAACGACG GCGTGTTGAC CACGAACTTA GGGACGTCGT TCGTGACGCA TGATGGCGGG
AAGAGTTGGG CACAGGAGAA GCCCTAG
 
Protein sequence
MSSDFQNRLR KNLEHPVPAE HPAPDVLNAY IEKVLTGAEE RQVTEHLAAC RECREVVFLA 
TGAAEEPVQP VVAAVPVKRV RWWAWAMPIV AVVVIAIFIG QPSLLRSKHT VEMAQARHDE
PQVPASTTVA TKTEVAPANK EEDKAKSLET YQPRKRIVPA QPLGGLATSP AAPPSPAPTE
RRELAKEKDV NGPVQNEMAR RAGVGGRIAE EAKPAVAMSA PAPAAADKVQ TLKQSEGAAA
ANLQQDSKLR DDRYAYSTES TNGASLSANG ASRSKAANLD TKAGQAFGGF AKSAAKKVDA
ATQWRVTTTG GLEHALLGEW KPALGDSSSH FLAVTTFGEN VWAGGKNLAL YHSPDNGVTW
ERQTLRVRIA ADITQIQFTS ANDGVLTTNL GTSFVTHDGG KSWAQEKP