| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4321 |
|---|
| Symbol | |
|---|
| ID | 4071894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 5130953 |
|---|
| End bp | 5132770 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637986354 |
|---|
| Product | OmpA/MotB family outer membrane protein |
|---|
| Protein accession | YP_593395 |
|---|
| Protein GI | 94971347 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAC TGAAACCACA AGCCAAGATA TTTCTTCTGA TCGTTATAGC AGTAGGTGTC
GTGTTCGGAC TGCGTACGGC GATGCAGCAT GGCATGATCC CGACACCCGG AATCATGAAG
TCCGTGGTAG CCACGCGGGT GGAACTGCCG TCGCAATCCG AGGCGCAGGT GGCCAATGTG
AAGGCCGCGC CGTATCCGAC GACCGCGGCG GCAAACGTTG CCGGCACCCG GATGCCCTTT
GACATCTGGG AGTGGAATGC GATGTTCGCG CTCATCTATG CGAACGGCGG CAAGGAAACG
ACGAAGGGAT CCTTGATGGA GAAGTACGGC GTGAACCTCG CCCTCCATCG TGAAGATTCG
AACTCGCAGA TGAAAGCCGA TCTGCTCGCG TGTGCGAAGC AGTTGCATGA CGGCGAGAGG
ACCTGCTCGT CCGGCGCAGC GGCGTTGGTG GTGATGGGCG ATGGCGGCGG ACAGTGGCTC
GCCGATCTGA ATCCACAGTT GAAGAAGTTG GGGCCGGATT ACCAGGCGGT AATCATTGGC
GCCGTAGGCC GCTCGAATGG CGAAGATGCG CTGCTCGGGC CGGCCGAGTG GAAGTCGAAT
CCGCAGAGCA TGAAGGGCAA GACGATTGTC GGCGTCATCC GCGACGGCGA TTGGAACATC
GCGCTGAACT TCATGGGCTC GAACGGATTG AAGAATAATC CGGACCTCAA GACGTACGAT
CCTGATGCGG TGAACTGGAT TTCGGCGCCG GATGAGGACT ACATCAAGGC CGTGACCGAG
GTGTACATCC CGAACCGTTG CGAAGATCGC AAGGTAGTAA AGGACGGGCG TCCGACGGGC
GACATGAAGA ACGTTTGTCC GGATGGCGTT GTGACCTGGA CGCCGGGTGA TGAACAGGCA
GTTCACGGTC GGCCGGGTAC GACGAAGATC GTGTCGTCGC ATGAGTACGC GGCGCAGATG
CCGTCAGTGA TACTAGGCAT TAAGAAGTTC TTCAGCGACA ACCGTGAAGA AACGCATGGC
CTGCTCGCAG CTGTATTTGA AGGGGCAGAT CAACTGAAGG CGTTCGATGC TGCGCGCCGC
AAGGCTGGCG AGATCTCCGC GAAGGTCTAC AACGATCAGA ACGGCGATTA TTGGTACAGC
TACTACATGG GGATGAACGA TCCGAAAACG GGTCAGCCGC TGGGTGGGTC CGCAGTCTTC
AACATGGAAG ACAACGTGAA CTACTTCGGT CTGGATGGGC GGCACAACAA CAACATGCGC
GCGACGTATG AGACGTTTGG CAATATCGCA ACGCAGAACT ATCCCGACCT GTTCAAAGAC
AATCCAATCC CGTCTTACAA AGAAGCGGTG GATACCTCGT TCTTGTTCGG CGCGCAAGCG
CTTCTGAACA CAGGCGGCGT GCAAGGGGCG GCCGCGGAGG CGGTGGACTA TGCGAAGGAA
GCGGCGAAGG GGACTGTGGT GGGCCACAAA GCGGTCTATA TCAATTTCGC CTCTGGTTCC
GACCAACCGC TGCCGACGAG CATTGCCGCA TTAAATCGCT TGAAGGATGA GCTCGCAATC
AACTCGCAAC TCGCGATCCA GATTGATGGC TACACGGACG ATGTCGGATC CGATATCCTC
AACCAGCCGT TGAGCGAGAA ACGCGCGCTC GCGGTAAAGC GCTACTTCCA GCAGACCGCG
CCGTTGAGCT TCCCGGAGAT GCGATTTAAG TCCGTAGCCG GACACGGATC GCAAAACCCG
TTGGCGGACA ATGGCACCTT GCAGGGCAAA GCATTAAACC GTCGCGTTGA GATCACCCAG
ATCGGCGGCG TTCAGTAA
|
|---|
| Protein sequence | MARLKPQAKI FLLIVIAVGV VFGLRTAMQH GMIPTPGIMK SVVATRVELP SQSEAQVANV
KAAPYPTTAA ANVAGTRMPF DIWEWNAMFA LIYANGGKET TKGSLMEKYG VNLALHREDS
NSQMKADLLA CAKQLHDGER TCSSGAAALV VMGDGGGQWL ADLNPQLKKL GPDYQAVIIG
AVGRSNGEDA LLGPAEWKSN PQSMKGKTIV GVIRDGDWNI ALNFMGSNGL KNNPDLKTYD
PDAVNWISAP DEDYIKAVTE VYIPNRCEDR KVVKDGRPTG DMKNVCPDGV VTWTPGDEQA
VHGRPGTTKI VSSHEYAAQM PSVILGIKKF FSDNREETHG LLAAVFEGAD QLKAFDAARR
KAGEISAKVY NDQNGDYWYS YYMGMNDPKT GQPLGGSAVF NMEDNVNYFG LDGRHNNNMR
ATYETFGNIA TQNYPDLFKD NPIPSYKEAV DTSFLFGAQA LLNTGGVQGA AAEAVDYAKE
AAKGTVVGHK AVYINFASGS DQPLPTSIAA LNRLKDELAI NSQLAIQIDG YTDDVGSDIL
NQPLSEKRAL AVKRYFQQTA PLSFPEMRFK SVAGHGSQNP LADNGTLQGK ALNRRVEITQ
IGGVQ
|
|---|
| |