| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4203 |
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| Symbol | |
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| ID | 4072162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 4980435 |
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| End bp | 4982462 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637986234 |
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| Product | oligopeptide transporter OPT |
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| Protein accession | YP_593277 |
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| Protein GI | 94971229 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.846925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0130006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATG CCCCGAAGCA CCGGCCTTAC GTGCCGGAAA CGATGCAGAT GAGCGAGTTC
ACCGTCCGCG CGGTCATCAT TGGACTAGTA CTGACGGTCA TTCTCGGGTC AGCAAACGCG
TATCTCGGTT TGCGAGCGGG CATGACGATC GCCGCAACCT ACCCGGCAGC GGTAATCGCC
ATGGCCGTTC TGAAACTGCT GAAAGGATCG CTGCTGGAAG AGAACATCGC GCGTACCGTC
GGTTCGATCG GCGAATCGGT GGCGGCGGGC GCGATCTTTA CGATCCCCGC TTTCGTAATT
GCGGGCGCGT GGCCCGTCTT CGACTTCAAG CATGCCTACT GGAATTCGGT AGCGTTGATG
GCGGTGGGCG GCACGCTCGG CATCCTTTTC GTAACGCTAT TGCGGCGGGT GATGGTGGAA
GATCCCGAGC TTCCCTTCCC TGAGTCGGTG GCGGCTTCGG AGATTCACAA GGCTGGCCAG
CAAGGCGCGA AGGCGGCGAA GATACTGTTC GCTAATATGG GGCTGGGAGG ATTGGTTTAC
TTCCTGGGGT CGATCAACCT GTTTTCTATC AGCAAAGAGT TTGTGCTCAA TGTGGGTCAA
CTAGGGCGCA GCATGCTGAA GATGACAAAG TCTCCGGGCG CTCCGACATT GCAGGCTGGT
GGCATGACGA CCTTTTCGGC ACCAGCAGTA AGTCCGGCTT ACCTCGGGGT GGGATACATC
ATCGGGCCGC GGCTAGGGGC GCTGAACTTT GCGGGGGGCG TTTTTGCGTG GGGCCTGCTG
GTTCCACTGC TCGTGTTCTT TCTTGGGCCG CAATTAGCAG CCACGATGCC GGATGGCGGG
AGTAGCCCAG ACTCATGGTC AGCGGCGGCT GGAGCCGTTT GGTTTTCAAT CGTGCGTCCC
ATCGCGGTGG GCGGGATGCT GGTAGGCGCG GGCTTCACGC TGTTCCGCAT GCGCAAGAAC
CTCATGATCG GCATGAAACG GGCGGTGAGC GACCTGAAAA AATCCGGCTC GCAGGCGACA
GCGACCGCGC GTGTGGATCG GGATTTGAAT ATCAAGGCTG TATTCCTTGG ACTCGCGATC
GTGCTTGTGG CGATGATCTT CCTCTACAAC TTCTTCGCAC ACAACTTCAC GGGGGCGATT
GTTGCTGCCG TCGTGATGAT CATCCTCGGA TTTTTCTTTG CCGCAGTTTC GGGGAACCTC
GTCGGAATGA TCGGCTCGTC AAACAATCCG ATTTCGGGAT TGACGCTTTG TACGCTAATC
ATCGCTGCGC TCTTGATGGT GAGCATCGGA GTGAAAGGAC CGAGCGGCGT TGCAGCCGTG
CTCGGCGTTG CAGCGGTGGT TTGCGTTTCG TCGGCGGTGG CGGGCGAGAT GCTGCAGGAC
CTGAAAGTGG GCTACATCCT AGGCGGTACA CCCGCAAAAA TGCAGCTCGG CGACCTCCTC
GGCATCGTGG TAGCCAGCGG CGTGTTGTTC TTCCCGTTGA TGATTTTGAA CAACGCGTAC
GGATTCGGCA GCCCGCAATT GCCCGCCCCG CAGGCTGGAT TGATGGCTTC GCTTTCGCAA
GGCATCGTCG GGGGCAACAT GCCTTGGCCG CTGGTGGTTG TCGGCATCCT GATGGGCTTC
GGGTTGATCC TGATTGAGGT AAGGAGCCCG ATGCTCTTTT CTGTGGGTAT GTACCTGCCC
TTGGAAACGA CGTTCGCGAT ATTTGTTGGT GGTCTCTTCC GCTGGGCGAC GGATAAGCTT
CGCGATCGAG CGAATCTGAA CGATGCACAA AAAGCGCGCG TGGAAAACGC GGGCGTGCTC
ACCGCATCGG GGCTGATCGC CGGCGAGGCG CTGATTGGCT TAGTCATCGC TGGGTTCCGC
GGAGTCGAGA AGCAGAAGGG TCATGCGATT CTGCCAGTAA TCTTTGCGCA TCCTCCCGTG
ATCCTCGGTG GGATCGTCCT GTTCCTGCTC GCTCTGCTGA TGATTCGCTT GCCCTTGGCA
AACGCCGGCA GCCCCGATGA ACCAGCTCCG CCGACGGCGA TCATGTAG
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| Protein sequence | MADAPKHRPY VPETMQMSEF TVRAVIIGLV LTVILGSANA YLGLRAGMTI AATYPAAVIA
MAVLKLLKGS LLEENIARTV GSIGESVAAG AIFTIPAFVI AGAWPVFDFK HAYWNSVALM
AVGGTLGILF VTLLRRVMVE DPELPFPESV AASEIHKAGQ QGAKAAKILF ANMGLGGLVY
FLGSINLFSI SKEFVLNVGQ LGRSMLKMTK SPGAPTLQAG GMTTFSAPAV SPAYLGVGYI
IGPRLGALNF AGGVFAWGLL VPLLVFFLGP QLAATMPDGG SSPDSWSAAA GAVWFSIVRP
IAVGGMLVGA GFTLFRMRKN LMIGMKRAVS DLKKSGSQAT ATARVDRDLN IKAVFLGLAI
VLVAMIFLYN FFAHNFTGAI VAAVVMIILG FFFAAVSGNL VGMIGSSNNP ISGLTLCTLI
IAALLMVSIG VKGPSGVAAV LGVAAVVCVS SAVAGEMLQD LKVGYILGGT PAKMQLGDLL
GIVVASGVLF FPLMILNNAY GFGSPQLPAP QAGLMASLSQ GIVGGNMPWP LVVVGILMGF
GLILIEVRSP MLFSVGMYLP LETTFAIFVG GLFRWATDKL RDRANLNDAQ KARVENAGVL
TASGLIAGEA LIGLVIAGFR GVEKQKGHAI LPVIFAHPPV ILGGIVLFLL ALLMIRLPLA
NAGSPDEPAP PTAIM
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