| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4110 |
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| Symbol | |
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| ID | 4072301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | - |
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| Start bp | 4865344 |
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| End bp | 4867185 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637986141 |
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| Product | 3-dehydroquinate dehydratase / shikimate dehydrogenase |
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| Protein accession | YP_593184 |
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| Protein GI | 94971136 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase
[COG0710] 3-dehydroquinate dehydratase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.471518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.833222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTT CCGGCTACAA CGCGCCCCGC ATCCTCCGCT CGCGCATTCC CCGTGTTTGC
GTCGCCGTAA TCGGCGCGAC GCCGGAGGAA ATGATCGCCA AAGCGGAAGG CATAATCCGC
GAAAACCCCT TTCTTGAGTT CAGGTTAGAC TACCTGACCA ACCCCGCAGC GGCGCTCCCC
AAGGTGAAGC GCCTGCTCGA AACCCGGCCC GATGCCGTCA TCATTGGTAC CTGTCGGAGG
GCGGTCAACG GGGGCAAATT TAAGGGGTCG GCCTCGGCGC AGCTCGAAAT CCTGGCCAAG
GCCGCGGCAG CCGGATGTCA ACTTCTGGAC GTGGAACTGG AGACAGCGGA GTCGGTGAAG
GCCTCGGAGC TGCAAAAGCT TCGTGAAGCA GCCTCGATCA TCCTGTCTTT TCATGACTTT
AAGGCAACCA AGAAGCTGGA TGACATCCTC GCCCGGATGG TGAAAATCCA CGTCGAATAT
TACAAAGTGG TCTCCACGGC GACCTCCCTG TACGACAACG TGCAGATGAT GAAGTTCCTG
GAGAAGCACG GGCACGATTA CTGGCTGATC GGGCTGTGCA TGGGCGAGCA AGGCATTATC
AGCCGGGTTT TGTCGGTCCG AGCGGGCAGT GTATTTACCT TTGCGGCGGC TTCCGCGGGC
GAAGAGACGG CGCCGGGACA GGTCACCTAT CGCGACCTGC GGAGCACTTT CCGTATTGAC
CACGTGGACG CCGCCACGCA TGTGTACGGC GTTGCCGGAG ATCCAGTAGC GCATTCGTTG
TCGCCGGCGA TGATGAACCT GGCGTTCCGC CGCGAGAACG TGAATGGCGT GTATCTGGCG
TTGCACACAA AAAAGACCGA CGATCTGATG GCGTGTATTC GCGACATTCC TCTGCGCGGG
TTGAGCATCA CCATGCCGCA TAAAGAGGAG ATGGTGAAGC ACCTCGCGAA CACCGACGAC
CTGGTGCGCA AGATTGGCGC GGTGAATACG ATCGTCCGCG CGCAAGACGG AAAGCTCTAC
GGATTTAATA CCGACGTGGC TGGGATCGTT GGGCCGCTTT CGGACCGCAT CACCGTGACT
GGGGCGAAAA TCCTGGTGGT AGGCGCCGGT GGCGCAGCGC GCGCAGCGGT GTTCGGATTG
GCGGCACGCG GGGCACACAT TTCGATCGTG AATCGCACCG TGCCGAAGGC GCAAAAGTTG
GCGAAGGAAG CGGGTGCGAA GGTCGTAAAG CGAGCCGATT TGAAAAAGCT CGATTTCGAC
GTGATCATCA ACGCGACCTC GGTCGGCATG ATGAACCCGA AGGTGAGCCC GCTCGAAGCC
GATGAATTGC GGGCGCGCAT CGTGTTCGAC ATGGTCTATA ACCCGGTGAA CACTCGGTTG
ATCCAGTTGG CGAAAGCCAA AGGATTGGCG ACGATTCCGG GCTACGAGAT GTTTGTGCAG
CAGGGAGCGC GTCAATTTGA GATTTGGAGC GGCAAGCCTG CGCCGGTCGA GGAAATGCGC
GGCATAGTGA TGAAGGCGCT CGGGGAATCG CCGGTTTTGG AAGCTCCCAC GCCTGTGCCG
CCACCGCTTC CAGCCGAAGC GCCGAAACCT GCGGTCGCCG CGAAACCGGT TGCTGGAAAA
ACTGCGCCGG TGACGAAATC TGTTTTAGCC GCGAAGCCCG CAGCTGCAAA GTCTGCTCTC
GTCGCGAAGC CCGCTCCTGT TACGAAGCAT GTGCCTGTAG CAGCAAACCA TAACGGGACC
GGCAAGAAAG CTGCCCCTGT CGCGAAGAAG CCGGAGCCCA AACCGGTCGC GAAGAAAGCC
GCTCCGCCTG CCAAGAAGAA GGTTGTGGCA AAGAAGAAGT AA
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| Protein sequence | MATSGYNAPR ILRSRIPRVC VAVIGATPEE MIAKAEGIIR ENPFLEFRLD YLTNPAAALP
KVKRLLETRP DAVIIGTCRR AVNGGKFKGS ASAQLEILAK AAAAGCQLLD VELETAESVK
ASELQKLREA ASIILSFHDF KATKKLDDIL ARMVKIHVEY YKVVSTATSL YDNVQMMKFL
EKHGHDYWLI GLCMGEQGII SRVLSVRAGS VFTFAAASAG EETAPGQVTY RDLRSTFRID
HVDAATHVYG VAGDPVAHSL SPAMMNLAFR RENVNGVYLA LHTKKTDDLM ACIRDIPLRG
LSITMPHKEE MVKHLANTDD LVRKIGAVNT IVRAQDGKLY GFNTDVAGIV GPLSDRITVT
GAKILVVGAG GAARAAVFGL AARGAHISIV NRTVPKAQKL AKEAGAKVVK RADLKKLDFD
VIINATSVGM MNPKVSPLEA DELRARIVFD MVYNPVNTRL IQLAKAKGLA TIPGYEMFVQ
QGARQFEIWS GKPAPVEEMR GIVMKALGES PVLEAPTPVP PPLPAEAPKP AVAAKPVAGK
TAPVTKSVLA AKPAAAKSAL VAKPAPVTKH VPVAANHNGT GKKAAPVAKK PEPKPVAKKA
APPAKKKVVA KKK
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