Gene Acid345_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3828 
Symbol 
ID4071112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4525953 
End bp4526876 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content59% 
IMG OID637985851 
Productmultiheme cytochrome 
Protein accessionYP_592902 
Protein GI94970854 
COG category 
COG ID 
TIGRFAM ID[TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.326628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGTCG GACGAGTCTT ACGATTCTTG CTGTGGACAA TTTCCGTTGT CGTCCTCTCT 
CTCATCGTGA TTCGCCCATT GCGGGCGTCA GGACCACAAG AGAAGAGCGC TGCAGTTCCG
GCGCCGGCAG AGCCTGCACA CTATGTCGGC GTTGACACCT GCAAGACGTG TCACGAAGAC
CTCTACAAGA CACAGTTCGA GCGGACCCCT CACTACAAAA CTACGCTGGG CGACGGCCAC
GGATGCGAAT CCTGTCACGG GCCGGGGTCG GCGCACGTTG AGGGCGGCGG CGACAAGTCG
AAGATCTTCT CTTTCAAGAA TGTATCGAAG CAGGAAATCA ACAGCCGGTG TCTGACCTGC
CACGGAGAAA AGCAGGAACA GCGCCACTTT GCGTCATCCG TCCATGCAGG CAGCAATGTT
GGCTGCCTCG ACTGCCATTC GCCCCACCAG GCACGCGAGC CGGAACACCT TCTCGTAAAG
AGCCAACCCG AGCTCTGCTA TTCCTGCCAC GCGGCCGCGA AAGCAGACTT CGCAAAGCCC
TACCACCACC GCGTCAATGA GCACCTTATT CAGTGCGCAG ACTGCCATAA CGTTCACGGC
ACCACCACCG TTCGACAGGC GCGCACCGTA GCCAATGGGG ACGCAGCCTG CTATAAGTGC
CACGCCGACA AACAAGGTCC GTTCGTTTAC GAACACGTGC CGGTAAAGAC CGAAGGCTGT
AGCAGCTGCC ACACGCCGCA CGGATCCACG AATCCGCGTT TGCTGCGCGT CAGCCAGGTG
AACCTGCTAT GTCTGCAATG CCACTCGTTC CCAGCGCAGG GACCCGCCGG ACCGGGACAT
AACCAGTCCA CTAAATACCA GGCGTGCACC ATGTGCCACG CGGCAATTCA CGGCTCCAAC
GCGAGCAATG TGTTCTTCCG ATGA
 
Protein sequence
MQVGRVLRFL LWTISVVVLS LIVIRPLRAS GPQEKSAAVP APAEPAHYVG VDTCKTCHED 
LYKTQFERTP HYKTTLGDGH GCESCHGPGS AHVEGGGDKS KIFSFKNVSK QEINSRCLTC
HGEKQEQRHF ASSVHAGSNV GCLDCHSPHQ AREPEHLLVK SQPELCYSCH AAAKADFAKP
YHHRVNEHLI QCADCHNVHG TTTVRQARTV ANGDAACYKC HADKQGPFVY EHVPVKTEGC
SSCHTPHGST NPRLLRVSQV NLLCLQCHSF PAQGPAGPGH NQSTKYQACT MCHAAIHGSN
ASNVFFR