| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_3754 |
|---|
| Symbol | |
|---|
| ID | 4069329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Koribacter versatilis Ellin345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008009 |
|---|
| Strand | - |
|---|
| Start bp | 4433043 |
|---|
| End bp | 4435460 |
|---|
| Gene Length | 2418 bp |
|---|
| Protein Length | 805 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637985776 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_592828 |
|---|
| Protein GI | 94970780 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1401] GTPase subunit of restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.433643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTA TGAACGCCGT TGACAAATAC TTATTGGAGT TCAAGCCAAG CGCCGCCGAA
TGGCTGTCCA ACCAGGGACC CAAAGAACAA TACGAGTTCT TCCGCGACTT TTTCACTCCG
AAGCGCTTAA AGAAAGCTAA TTGGGCTGAC TTTCAGAAAA TTGGCGAACA CCTGAATTGC
TTCGCTGCTA TGCCTTTAGC CAAAGCGAAC GCCCTCGGTC GTCCTAATCA TCCGCTAAAG
CGATATCGTG AGAGCTTCGA ATATCTCGCA AATGGGAAAG ATCCAGTTGA AGAACGAATA
CGCAAGTTCC ACGGAGATGA CGCTTATCGA TTGGCGTATT TCGGCAATTC TGCTGTGAGC
GAATTGGCCG GATTCCTTTT CCCGAGCGAG TTTGTTCTGT TCAACGCCCG AGATCAGTTT
GCAGCAGATT TCCTGAAGAT TACACCAGCA TTCGAATCTA CGGATGATCT TGTATCAAAG
CTAACCAAAT TTTGCGATGC TGTGCAGCCG GTGGCCGAGC GGTATGTGCA GCTCGTAGGC
AGGCAGACAG ATGTACCCCT CAATCTTGAA ATCGATCAGT TCTTTAGCTG GATATACACA
AAGTATTCCG GAAAGAAAGA TGCGCCCACG CGCTTTTGGG TTATCGGCGC TGGAGACCGG
GCCTCAGAGT GGAAGGAGTT CTACGAACAC AATTTCGTTG CGATCGGCTG GGACGAGCTG
GGAGATCTTA CTGCGTTCGA GTCGCTGGAG CAGCTTCAGA AAAGGTTGGA AAAGATTTGG
CCAACCGACG CAAAGCAGCG AAATAACAGC CGTACCTGCT GGGACTTTGC GAACGAGTTG
CATCCGGGCG ACGCAATCTT CGTCAAGGAT GGCGTTAAGA AGGCCGTTGG ACTTGGGGTT
GTCGAGAGCG ATTACCGTTT TGAGGCCGAC AGGTCTTCTT ACAAGCATGT TCGGTCGGTA
CGTTGGACAT GGAAAGGCGA CTTTGACTTA CCGCATGGCC TGCAACTCCC ACTGAAAACG
TTAACCCTTT TGACTAACAC GGACGTGCTC GCGGCATTGA AGAAAGTGGC GACATTTACG
GCCTCTGCAA CAGAGGAGAA GAACACTCAA CATTGGTGGA TCAACGCGAA TCCAAAAATC
TGGAATTTCA GCGAGACCCC GGTCGGCGGT AGACAGGTCT ATACATCGCA TAACGAAAGA
GGTAACAAGC GCCAAAAGTA TAAATATTTT GAAGAGGTCA AGACGGGGGA TTGGCTGATT
GGGTATGTTA CGAGCCCAGA CCGGGAGCTC GTGGCATTAG CTCGTGTCAC GAAAGCGTTG
GGGCCGCAGG CGCCGGATGG CACAGAGGGC ATTGAATTCG AAAAAGTTGA GCAGGTAGCC
AATCCGATAC CGTTGCACGA ACTTCAAAAA AACCCGGCCC TACAGAGCTG CGAGCCTATT
TTGAGCAATC AGGGCAGCCT CTTCCGTTTG ACCTCCGAGG AATTTGCAGT AATTCGTTCA
CTGATCGATG ACCTAAATCC TCTCGCCCCG ACGTCTCATA GCGCCTTCTC TAAGAAAGAC
GCTTTAAAGG CACTCTTCTT AAGCGAAGAG CAGCTTGATG AAATTGCTTT CTCTCTTCAG
GACAAGAAAA ATGTGATCCT CCAGGGACCC CCGGGAGTTG GGAAGACATA CGTCGCCAAG
AAATTGGCGT ATCTGTTGAT GAAGGAGGTC GATAGCGCGA GGGTGCAGAT GGTGCAATTT
CATCAATCAT ACTCTTACGA AGACTTCATT CAGGGTTATC GTCCGAGTGA CGATGGCCAT
TTTGAGCTTC GAAATGGACA CTTTTTTCAA TTCTGCCGGA AAGCGCAGCG CGATCCCGAC
AAGCGCCCAT TCATCTTCAT CATCGATGAG ATCAATAGGG GTAATCTGAG CAAGATTTTG
GGTGAAGTGA TGATGTTAAT TGAGCCAGAT AAGAGGGGAC CTGAATTCGC GATACCTCTT
GCGTATTCCG GTTCAGCTGA CGAGACGTTT TTTGTTCCGA GCAATGTCTT CGTCATCGGG
CTGATGAACA CTGCCGATCG TTCTTTAGCA ATGGTCGACT ATGCGCTGAG GAGGAGATTT
AGGTTTATCG GTCTGAAGCC GGAGTTTAAG AGTGAACGCT TTTCTGGATT TCTTTTGCAG
GCTGGCGCGA AACAGCCACT CATCAAGAAG ATTGTTAGCC GGTTATCCAC ACTGAATGAT
GAGATCTCAG GCGACGAAAA AAACCTCGGC CCGGGATATC GGATCGGGCA TAGCTTTTTC
TGCCCGATGG ATGGACGAGC TCCTGACGAG GTTTGGTACC GAGCCGTCAT CAACTCCGAG
ATAAAGCCAC TTCTCGATGA ATATTGGCTT GATGATGAAG ACAAGGTGAA TTCTCTGATT
GCCGCTCTGA CCGAGTAA
|
|---|
| Protein sequence | MTTMNAVDKY LLEFKPSAAE WLSNQGPKEQ YEFFRDFFTP KRLKKANWAD FQKIGEHLNC
FAAMPLAKAN ALGRPNHPLK RYRESFEYLA NGKDPVEERI RKFHGDDAYR LAYFGNSAVS
ELAGFLFPSE FVLFNARDQF AADFLKITPA FESTDDLVSK LTKFCDAVQP VAERYVQLVG
RQTDVPLNLE IDQFFSWIYT KYSGKKDAPT RFWVIGAGDR ASEWKEFYEH NFVAIGWDEL
GDLTAFESLE QLQKRLEKIW PTDAKQRNNS RTCWDFANEL HPGDAIFVKD GVKKAVGLGV
VESDYRFEAD RSSYKHVRSV RWTWKGDFDL PHGLQLPLKT LTLLTNTDVL AALKKVATFT
ASATEEKNTQ HWWINANPKI WNFSETPVGG RQVYTSHNER GNKRQKYKYF EEVKTGDWLI
GYVTSPDREL VALARVTKAL GPQAPDGTEG IEFEKVEQVA NPIPLHELQK NPALQSCEPI
LSNQGSLFRL TSEEFAVIRS LIDDLNPLAP TSHSAFSKKD ALKALFLSEE QLDEIAFSLQ
DKKNVILQGP PGVGKTYVAK KLAYLLMKEV DSARVQMVQF HQSYSYEDFI QGYRPSDDGH
FELRNGHFFQ FCRKAQRDPD KRPFIFIIDE INRGNLSKIL GEVMMLIEPD KRGPEFAIPL
AYSGSADETF FVPSNVFVIG LMNTADRSLA MVDYALRRRF RFIGLKPEFK SERFSGFLLQ
AGAKQPLIKK IVSRLSTLND EISGDEKNLG PGYRIGHSFF CPMDGRAPDE VWYRAVINSE
IKPLLDEYWL DDEDKVNSLI AALTE
|
|---|
| |