Gene Acid345_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3624 
Symbol 
ID4070144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4290232 
End bp4291188 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content59% 
IMG OID637985647 
Productrubrerythrin 
Protein accessionYP_592699 
Protein GI94970651 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.457724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.52247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAATT TTGAGAGCCT CAATGTACGG GAGATCCTCG CACTCGCCAT CACGCTGGAA 
GAGGAAGACG CGCGCGTCTA TGCCGACTTC GCGGACGGGC TAAAAGACAC GTTCCCAGCA
ACGGCAGAAA TTTTCGAAGG CATGCGGCAG GAAGAGATTC AGCATCGGCA GAAATTGTTC
GAGGCCTACC GGGAGCGCTT CGGCGAGCAT ATTCCGCTGA TCCGTCGCGA AGACGTGCGC
GGATTTGTGA AGCGGCGTCC GATCTGGCTG GTGCGTCCGT TGGGTCTCGA CGTCGTGCGC
AAACAAGCCG CAGCCATGGA AGAGGAAACA CGCCGCTTTT ATGAGCAGGC AGCCAAGCGG
ACGAGTGACA TTGGCATTCG GCAGTTGCTC GATGAACTGG CGGAGGAAGA AATTTCGCAC
GAGCATCGCG CGGAAGAACT GCAAGAAGAA AAGTTGCAGC CGGACATCCG CGAGCAAGAG
GAACACGCGA AACGACGGCT GTTCATGCTG CAGGTGGTAC AGCCGGGACT TGCCGGATTG
ATGGACGGGT CGGTCTCAAC GCTGGCGCCC GTGTTCGCCG CGGCGTTCGC GACACGAAGC
AGCTGGGACG CATTTCTGGT TGGAATGGCG GCGTCGATCG GCGCTGGAAT CAGCATGGGC
TTTGCAGAGG CGTTATCCGA TGATGGCAGC CTGACAGGGC GCGGGCATCC GTGGATTCGA
GGCTTGATTT GCGGGCTGAT GACGACGCTG GGCGGCATCG GGCATACGCT GCCCTATCTG
ATCAAAAACT TTGGCTTGGC GACGACGGTG GCCGTGATCA TCGTAGCGAT CGAGCTGATG
GTGATTTCGT TTATCCGCCA CAAGTACATG GACACACCGT TCGTGTCGGC GGCGTTGCAA
GTCGTAGTTG GCGGCGTCCT GGTTTTCCTT ACCGGGATCC TGATCGGCAG TTCTTAG
 
Protein sequence
MRNFESLNVR EILALAITLE EEDARVYADF ADGLKDTFPA TAEIFEGMRQ EEIQHRQKLF 
EAYRERFGEH IPLIRREDVR GFVKRRPIWL VRPLGLDVVR KQAAAMEEET RRFYEQAAKR
TSDIGIRQLL DELAEEEISH EHRAEELQEE KLQPDIREQE EHAKRRLFML QVVQPGLAGL
MDGSVSTLAP VFAAAFATRS SWDAFLVGMA ASIGAGISMG FAEALSDDGS LTGRGHPWIR
GLICGLMTTL GGIGHTLPYL IKNFGLATTV AVIIVAIELM VISFIRHKYM DTPFVSAALQ
VVVGGVLVFL TGILIGSS